MitoAge

Micromesistius poutassou

Blue whiting

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Maximum lifespan
20 yr
AnAge record
mtDNA size
16,573 bp
RefSeq NC_015102.1
GC content
45.47%
Whole genome
Non-coding
1,019 bp
D-loop 904 bp

Where Blue whiting sits among 2,335 species

Whole-genome GC content against maximum lifespan. Blue whiting has the 895th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Blue whiting
  • This species
  • Other ray-finned fishes
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,573 bp
GC skew (G − C) / (G + C)
−0.242
AT skew (A − T) / (A + T)
+0.006

Life history

Maximum lifespan
20 years
Adult weight
456.5 g
Female sexual maturity
602 days
Male sexual maturity
602 days

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 04029)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,573 bp
Protein-coding11,405 bp
12S rRNA949 bp
16S rRNA1,664 bp
All tRNA1,536 bp
D-loop904 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1975 bp23.9%29.2%17.3%29.5%46.87%−0.260−0.100
ND2NADH dehydrogenase subunit 21,045 bp25.6%26.8%14.7%32.9%47.66%−0.382−0.024
COX1Cytochrome c oxidase subunit I1,551 bp24.0%28.9%18.7%28.4%47.07%−0.205−0.091
COX2Cytochrome c oxidase subunit II691 bp28.9%27.4%15.2%28.5%43.71%−0.305+0.028
ATP8ATP synthase F0 subunit 8168 bp31.0%28.0%9.5%31.5%41.07%−0.536+0.051
ATP6ATP synthase F0 subunit 6682 bp26.0%28.3%14.1%31.7%45.75%−0.385−0.043
COX3Cytochrome c oxidase subunit III786 bp25.7%29.1%16.4%28.8%45.17%−0.273−0.063
ND3NADH dehydrogenase subunit 3349 bp23.2%31.2%15.2%30.4%45.56%−0.333−0.147
ND4LNADH dehydrogenase subunit 4L297 bp22.9%28.6%16.5%32.0%48.49%−0.319−0.111
ND4NADH dehydrogenase subunit 41,381 bp24.8%29.3%15.1%30.8%45.91%−0.341−0.084
ND5NADH dehydrogenase subunit 51,839 bp26.5%27.9%15.4%30.2%45.62%−0.325−0.026
ND6NADH dehydrogenase subunit 6522 bp34.7%15.7%17.0%32.6%49.62%−0.313+0.376
CYTBCytochrome b1,141 bp23.7%30.5%16.3%29.5%45.84%−0.289−0.126
12S rRNA12S ribosomal RNA949 bp32.2%22.6%21.6%23.6%45.21%−0.044+0.177
16S rRNA16S ribosomal RNA1,664 bp33.5%23.1%20.1%23.2%43.33%−0.071+0.183
D-loopControl region (D-loop)904 bp30.2%31.4%15.6%22.8%38.39%−0.187−0.020

Codon usage

Counts per codon, darker is more frequent

3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%
UUU107
UUC125
Leu L17.4%
UUA107
UUG29
CUU153
CUC149
CUA169
CUG54
Ile I6.5%
AUU132
AUC117
Met M4.6%
AUA111
AUG65
Val V6.0%
GUU61
GUC56
GUA76
GUG36
Ser S6.8%
UCU60
UCC65
UCA62
UCG11
AGU12
AGC49
Pro P5.6%
CCU66
CCC105
CCA36
CCG8
Thr T7.7%
ACU70
ACC88
ACA121
ACG14
Ala A9.3%
GCU89
GCC146
GCA99
GCG21
Tyr Y2.9%
UAU45
UAC64
His H2.8%
CAU35
CAC71
Gln Q2.5%
CAA74
CAG20
Asn N2.9%
AAU33
AAC78
Lys K1.9%
AAA56
AAG15
Asp D2.0%
GAU20
GAC57
Glu E2.6%
GAA72
GAG27
Cys C0.7%
UGU8
UGC18
Trp W3.2%
UGA103
UGG17
Arg R2.0%
CGU10
CGC15
CGA38
CGG13
Gly G6.4%
GGU31
GGC92
GGA71
GGG48
Stop 0.2%
UAA4
UAG2
AGA0
AGG1

Genome map

38 annotated features in NC_015102.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (45.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,017949 bp+45.2%
tRNA-ValTransfer RNA1,0181,08972 bp+–
16S rRNARibosomal RNA1,0902,7531,664 bp+43.3%
tRNA-Leu (UUR)Transfer RNA2,7542,82774 bp+–
ND1Protein-coding gene2,8283,802975 bp+46.9%
tRNA-IleTransfer RNA3,8043,87370 bp+–
tRNA-GlnTransfer RNA3,8743,94370 bp−–
tRNA-MetTransfer RNA3,9434,01270 bp+–
ND2Protein-coding gene4,0135,0571,045 bp+47.7%
tRNA-TrpTransfer RNA5,0585,12770 bp+–
tRNA-AlaTransfer RNA5,1295,19769 bp−–
tRNA-AsnTransfer RNA5,2005,27374 bp−–
tRNA-CysTransfer RNA5,3075,37266 bp−–
tRNA-TyrTransfer RNA5,3735,43967 bp−–
COX1Protein-coding gene5,4416,9911,551 bp+47.1%
tRNA-Ser (UCN)Transfer RNA6,9947,06471 bp−–
tRNA-AspTransfer RNA7,0697,13466 bp+–
COX2Protein-coding gene7,1497,839691 bp+43.7%
tRNA-LysTransfer RNA7,8407,91374 bp+–
ATP8Protein-coding gene7,9158,082168 bp+41.1%
ATP6Protein-coding gene8,0738,754682 bp+45.8%
COX3Protein-coding gene8,7569,541786 bp+45.2%
tRNA-GlyTransfer RNA9,5429,60968 bp+–
ND3Protein-coding gene9,6119,959349 bp+45.6%
tRNA-ArgTransfer RNA9,96010,02869 bp+–
ND4LProtein-coding gene10,02910,325297 bp+48.5%
ND4Protein-coding gene10,31911,6991,381 bp+45.9%
tRNA-HisTransfer RNA11,70011,76869 bp+–
tRNA-Ser (AGY)Transfer RNA11,76911,83668 bp+–
tRNA-Leu (CUN)Transfer RNA11,83911,91173 bp+–
ND5Protein-coding gene11,91213,7501,839 bp+45.6%
ND6Protein-coding gene13,74614,267522 bp−49.6%
tRNA-GluTransfer RNA14,26814,33669 bp−–
CYTBProtein-coding gene14,34115,4811,141 bp+45.8%
tRNA-ThrTransfer RNA15,48215,55271 bp+–
tRNA-ProTransfer RNA15,60115,66969 bp−–
D-loopControl region15,67016,573904 bp–38.4%

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