Monotaxis grandoculis
Humpnose big-eye bream
GC content
48.75%
Whole genome
Non-coding
563 bp
D-loop 503 bp
Where Humpnose big-eye bream sits among 2,335 species
Whole-genome GC content against maximum lifespan. Humpnose big-eye bream has the 1,770th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,174 bp
- GC skew (G − C) / (G + C)
- −0.293
- AT skew (A − T) / (A + T)
- +0.057
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an estimate, not an observed animal
- Data quality
- low
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,174 bp
Protein-coding11,407 bp
12S rRNA949 bp
16S rRNA1,698 bp
All tRNA1,557 bp
D-loop503 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 51.49% | −0.394 | −0.032 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 52.87% | −0.476 | +0.026 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 48.68% | −0.184 | −0.078 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 47.61% | −0.252 | −0.006 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 50.00% | −0.548 | +0.119 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 52.27% | −0.429 | −0.031 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 50.96% | −0.295 | −0.029 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 51.29% | −0.397 | −0.106 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 51.52% | −0.373 | −0.028 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 48.37% | −0.356 | −0.007 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 48.45% | −0.403 | +0.065 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 50.00% | −0.464 | +0.448 | |||||
| CYTBCytochrome b | 1,141 bp | 48.55% | −0.368 | −0.053 | |||||
| 12S rRNA12S ribosomal RNA | 949 bp | 50.26% | −0.094 | +0.195 | |||||
| 16S rRNA16S ribosomal RNA | 1,698 bp | 47.35% | −0.147 | +0.224 | |||||
| D-loopControl region (D-loop) | 503 bp | 33.80% | −0.106 | +0.099 |
Codon usage
Counts per codon, darker is more frequent3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.9%
UUU71
UUC152
Leu L17.6%
UUA60
UUG22
CUU108
CUC232
CUA178
CUG71
Ile I7.0%
AUU112
AUC156
Met M3.8%
AUA73
AUG71
Val V5.9%
GUU51
GUC80
GUA55
GUG37
Ser S6.5%
UCU33
UCC80
UCA63
UCG11
AGU11
AGC49
Pro P5.9%
CCU43
CCC94
CCA73
CCG13
Thr T7.9%
ACU42
ACC128
ACA102
ACG29
Ala A9.5%
GCU59
GCC173
GCA107
GCG22
Tyr Y2.9%
UAU35
UAC77
His H2.8%
CAU16
CAC90
Gln Q2.5%
CAA74
CAG23
Asn N3.0%
AAU31
AAC84
Lys K1.8%
AAA61
AAG9
Asp D2.0%
GAU16
GAC60
Glu E2.7%
GAA74
GAG29
Cys C0.7%
UGU5
UGC22
Trp W3.2%
UGA103
UGG17
Arg R2.0%
CGU15
CGC14
CGA40
CGG8
Gly G6.2%
GGU25
GGC92
GGA63
GGG56
Stop 0.2%
UAA4
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_010957.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (48.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,017 | 949 bp | + | 50.3% |
| tRNA-Val | Transfer RNA | 1,018 | 1,089 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,090 | 2,787 | 1,698 bp | + | 47.4% |
| tRNA-Leu (UUR) | Transfer RNA | 2,788 | 2,862 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,863 | 3,837 | 975 bp | + | 51.5% |
| tRNA-Ile | Transfer RNA | 3,842 | 3,911 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,911 | 3,981 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,981 | 4,049 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,050 | 5,095 | 1,046 bp | + | 52.9% |
| tRNA-Trp | Transfer RNA | 5,096 | 5,169 | 74 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,170 | 5,238 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,240 | 5,312 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,349 | 5,415 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,416 | 5,487 | 72 bp | − | – |
| COX1 | Protein-coding gene | 5,489 | 7,039 | 1,551 bp | + | 48.7% |
| tRNA-Ser (UCN) | Transfer RNA | 7,041 | 7,111 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,115 | 7,186 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,191 | 7,881 | 691 bp | + | 47.6% |
| tRNA-Lys | Transfer RNA | 7,882 | 7,956 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,957 | 8,124 | 168 bp | + | 50.0% |
| ATP6 | Protein-coding gene | 8,115 | 8,797 | 683 bp | + | 52.3% |
| COX3 | Protein-coding gene | 8,798 | 9,582 | 785 bp | + | 51.0% |
| tRNA-Gly | Transfer RNA | 9,583 | 9,654 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,655 | 10,003 | 349 bp | + | 51.3% |
| tRNA-Arg | Transfer RNA | 10,004 | 10,072 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,073 | 10,369 | 297 bp | + | 51.5% |
| ND4 | Protein-coding gene | 10,363 | 11,743 | 1,381 bp | + | 48.4% |
| tRNA-His | Transfer RNA | 11,744 | 11,812 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,813 | 11,880 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,886 | 11,958 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,959 | 13,797 | 1,839 bp | + | 48.5% |
| ND6 | Protein-coding gene | 13,794 | 14,315 | 522 bp | − | 50.0% |
| tRNA-Glu | Transfer RNA | 14,317 | 14,385 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,390 | 15,530 | 1,141 bp | + | 48.6% |
| tRNA-Thr | Transfer RNA | 15,531 | 15,603 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,603 | 15,671 | 69 bp | − | – |
| D-loop | Control region | 15,672 | 16,174 | 503 bp | – | 33.8% |