Moxostoma erythrurum

Golden redhorse

Maximum lifespan

11 yr

AnAge record

mtDNA size

16,602 bp

RefSeq NC_084082.1

GC content

42.83%

Whole genome

Non-coding

1,001 bp

D-loop 906 bp

Where Golden redhorse sits among 2,335 species

Whole-genome GC content against maximum lifespan. Golden redhorse has the 1,513th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,602 bp

GC skew (G − C) / (G + C): −0.191
AT skew (A − T) / (A + T): +0.042

Life history

Maximum lifespan: 11 years
Adult weight: 2.2 kg

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 03887)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: New in build 2
In the database since: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,602 bp

Protein-coding11,407 bp

12S rRNA950 bp

16S rRNA1,682 bp

All tRNA1,562 bp

D-loop906 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Moxostoma erythrurum genes

ND1NADH dehydrogenase subunit 1	975 bp	27.4%	28.5%	17.2%	26.9%	44.10%	−0.219	−0.020
ND2NADH dehydrogenase subunit 2	1,045 bp	27.9%	26.7%	16.1%	29.3%	45.36%	−0.291	+0.023
COX1Cytochrome c oxidase subunit I	1,551 bp	26.4%	31.9%	17.7%	24.0%	41.72%	−0.150	−0.093
COX2Cytochrome c oxidase subunit II	691 bp	29.7%	28.9%	17.2%	24.2%	41.39%	−0.168	+0.012
ATP8ATP synthase F0 subunit 8	168 bp	34.5%	28.0%	12.5%	25.0%	37.50%	−0.333	+0.105
ATP6ATP synthase F0 subunit 6	684 bp	28.8%	32.2%	14.2%	24.9%	39.04%	−0.273	−0.055
COX3Cytochrome c oxidase subunit III	785 bp	26.9%	29.0%	17.7%	26.4%	44.08%	−0.197	−0.039
ND3NADH dehydrogenase subunit 3	349 bp	27.5%	32.1%	14.3%	26.1%	40.40%	−0.291	−0.077
ND4LNADH dehydrogenase subunit 4L	297 bp	23.9%	33.7%	17.5%	24.9%	42.42%	−0.175	−0.170
ND4NADH dehydrogenase subunit 4	1,382 bp	30.0%	28.4%	15.0%	26.6%	41.61%	−0.280	+0.026
ND5NADH dehydrogenase subunit 5	1,839 bp	29.9%	29.1%	14.6%	26.4%	40.95%	−0.288	+0.013
ND6NADH dehydrogenase subunit 6	522 bp	38.9%	16.5%	14.9%	29.7%	44.64%	−0.330	+0.405
CYTBCytochrome b	1,141 bp	27.0%	30.1%	15.8%	27.1%	42.86%	−0.264	−0.055
12S rRNA12S ribosomal RNA	950 bp	30.9%	20.5%	23.2%	25.4%	48.53%	−0.046	+0.202
16S rRNA16S ribosomal RNA	1,682 bp	34.8%	21.0%	21.3%	22.9%	44.17%	−0.036	+0.246
D-loopControl region (D-loop)	906 bp	33.2%	29.2%	15.8%	21.7%	37.53%	−0.159	+0.064

Codon usage

Counts per codon, darker is more frequent

Gene

3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.9%

UUU126

UUC99

Leu L16.4%

UUA164

UUG37

CUU124

CUC58

CUA194

CUG47

Ile I7.4%

AUU196

AUC84

Met M4.4%

AUA108

AUG60

Val V6.1%

GUU65

GUC35

GUA101

GUG32

Ser S6.5%

UCU57

UCC58

UCA70

UCG9

AGU16

AGC37

Pro P5.6%

CCU44

CCC68

CCA90

CCG11

Thr T7.7%

ACU56

ACC100

ACA122

ACG17

Ala A9.1%

GCU83

GCC131

GCA116

GCG17

Tyr Y3.0%

UAU63

UAC51

His H2.8%

CAU46

CAC61

Gln Q2.6%

CAA87

CAG12

Asn N3.2%

AAU48

AAC73

Lys K2.0%

AAA59

AAG17

Asp D2.0%

GAU27

GAC50

Glu E2.8%

GAA77

GAG28

Cys C0.7%

UGU13

UGC13

Trp W3.2%

UGA102

UGG19

Arg R2.0%

CGU11

CGC9

CGA42

CGG14

Gly G6.5%

GGU35

GGC37

GGA125

GGG49

Stop 0.2%

UAA7

UAG0

AGA0

AGG0

Genome map

38 annotated features in NC_084082.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (42.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Moxostoma erythrurum (NC_084082.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	69	69 bp	+	–
12S rRNA	Ribosomal RNA	70	1,019	950 bp	+	48.5%
tRNA-Val	Transfer RNA	1,020	1,091	72 bp	+	–
16S rRNA	Ribosomal RNA	1,092	2,773	1,682 bp	+	44.2%
tRNA-Leu (UUR)	Transfer RNA	2,774	2,848	75 bp	+	–
ND1	Protein-coding gene	2,850	3,824	975 bp	+	44.1%
tRNA-Ile	Transfer RNA	3,835	3,905	71 bp	+	–
tRNA-Gln	Transfer RNA	3,905	3,975	71 bp	−	–
tRNA-Met	Transfer RNA	3,977	4,045	69 bp	+	–
ND2	Protein-coding gene	4,046	5,090	1,045 bp	+	45.4%
tRNA-Trp	Transfer RNA	5,091	5,163	73 bp	+	–
tRNA-Ala	Transfer RNA	5,165	5,233	69 bp	−	–
tRNA-Asn	Transfer RNA	5,235	5,307	73 bp	−	–
tRNA-Cys	Transfer RNA	5,339	5,404	66 bp	−	–
tRNA-Tyr	Transfer RNA	5,406	5,476	71 bp	−	–
COX1	Protein-coding gene	5,478	7,028	1,551 bp	+	41.7%
tRNA-Ser (UCN)	Transfer RNA	7,030	7,100	71 bp	−	–
tRNA-Asp	Transfer RNA	7,103	7,175	73 bp	+	–
COX2	Protein-coding gene	7,190	7,880	691 bp	+	41.4%
tRNA-Lys	Transfer RNA	7,881	7,956	76 bp	+	–
ATP8	Protein-coding gene	7,958	8,125	168 bp	+	37.5%
ATP6	Protein-coding gene	8,116	8,799	684 bp	+	39.0%
COX3	Protein-coding gene	8,799	9,583	785 bp	+	44.1%
tRNA-Gly	Transfer RNA	9,584	9,655	72 bp	+	–
ND3	Protein-coding gene	9,656	10,004	349 bp	+	40.4%
tRNA-Arg	Transfer RNA	10,005	10,074	70 bp	+	–
ND4L	Protein-coding gene	10,075	10,371	297 bp	+	42.4%
ND4	Protein-coding gene	10,365	11,746	1,382 bp	+	41.6%
tRNA-His	Transfer RNA	11,747	11,816	70 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,817	11,885	69 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,887	11,959	73 bp	+	–
ND5	Protein-coding gene	11,960	13,798	1,839 bp	+	41.0%
ND6	Protein-coding gene	13,795	14,316	522 bp	−	44.6%
tRNA-Glu	Transfer RNA	14,317	14,385	69 bp	−	–
CYTB	Protein-coding gene	14,390	15,530	1,141 bp	+	42.9%
tRNA-Thr	Transfer RNA	15,531	15,602	72 bp	+	–
tRNA-Pro	Transfer RNA	15,602	15,671	70 bp	−	–
D-loop	Control region	15,673	16,578	906 bp	–	37.5%