MitoAge

Mugil cephalus

Striped mullet

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Maximum lifespan
16 yr
AnAge record
mtDNA size
16,685 bp
RefSeq NC_003182.1
GC content
45.07%
Whole genome
Non-coding
1,005 bp
D-loop 884 bp

Where Striped mullet sits among 2,335 species

Whole-genome GC content against maximum lifespan. Striped mullet has the 1,148th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Striped mullet
  • This species
  • Other ray-finned fishes
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,685 bp
GC skew (G − C) / (G + C)
−0.314
AT skew (A − T) / (A + T)
+0.025

Life history

Maximum lifespan
16 years
Adult weight
4.4 kg
Female sexual maturity
2 years
Male sexual maturity
2 years

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 04069)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,685 bp
Protein-coding11,444 bp
12S rRNA958 bp
16S rRNA1,718 bp
All tRNA1,560 bp
D-loop884 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1969 bp25.9%28.8%13.0%32.3%45.30%−0.426−0.053
ND2NADH dehydrogenase subunit 21,072 bp26.4%25.6%11.4%36.7%48.04%−0.526+0.016
COX1Cytochrome c oxidase subunit I1,569 bp24.3%30.7%18.2%26.8%44.93%−0.191−0.116
COX2Cytochrome c oxidase subunit II691 bp28.2%30.0%15.1%26.8%41.82%−0.280−0.030
ATP8ATP synthase F0 subunit 8168 bp32.1%23.8%10.7%33.3%44.05%−0.514+0.149
ATP6ATP synthase F0 subunit 6683 bp26.8%28.6%11.4%33.2%44.66%−0.489−0.032
COX3Cytochrome c oxidase subunit III784 bp26.3%27.6%15.9%30.2%46.17%−0.309−0.024
ND3NADH dehydrogenase subunit 3349 bp21.5%30.1%14.6%33.8%48.42%−0.396−0.167
ND4LNADH dehydrogenase subunit 4L297 bp22.2%26.9%15.2%35.7%50.84%−0.404−0.096
ND4NADH dehydrogenase subunit 41,381 bp25.9%28.0%13.3%32.9%46.20%−0.426−0.039
ND5NADH dehydrogenase subunit 51,842 bp27.1%27.5%13.1%32.2%45.33%−0.420−0.007
ND6NADH dehydrogenase subunit 6522 bp33.5%17.2%13.6%35.6%49.23%−0.447+0.321
CYTBCytochrome b1,138 bp24.6%28.8%15.0%31.5%46.57%−0.355−0.079
12S rRNA12S ribosomal RNA958 bp30.2%22.3%20.9%26.6%47.50%−0.121+0.149
16S rRNA16S ribosomal RNA1,718 bp33.5%22.0%19.0%25.5%44.47%−0.147+0.208
D-loopControl region (D-loop)884 bp36.0%32.4%12.8%18.9%31.67%−0.193+0.053

Codon usage

Counts per codon, darker is more frequent

3,819 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU91
UUC147
Leu L17.8%
UUA98
UUG18
CUU137
CUC190
CUA190
CUG47
Ile I7.5%
AUU160
AUC127
Met M3.9%
AUA108
AUG41
Val V5.2%
GUU45
GUC72
GUA64
GUG18
Ser S6.7%
UCU44
UCC93
UCA53
UCG8
AGU12
AGC47
Pro P5.8%
CCU64
CCC92
CCA64
CCG3
Thr T7.8%
ACU61
ACC127
ACA100
ACG8
Ala A8.6%
GCU81
GCC146
GCA92
GCG9
Tyr Y3.0%
UAU44
UAC72
His H2.7%
CAU33
CAC71
Gln Q2.6%
CAA86
CAG12
Asn N2.9%
AAU40
AAC70
Lys K2.1%
AAA73
AAG8
Asp D1.8%
GAU19
GAC49
Glu E2.7%
GAA88
GAG14
Cys C0.8%
UGU10
UGC21
Trp W3.1%
UGA99
UGG19
Arg R2.1%
CGU14
CGC18
CGA41
CGG9
Gly G6.4%
GGU36
GGC75
GGA93
GGG42
Stop 0.2%
UAA5
UAG1
AGA0
AGG0

Genome map

38 annotated features in NC_003182.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (45.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,027958 bp+47.5%
tRNA-ValTransfer RNA1,0281,10174 bp+–
16S rRNARibosomal RNA1,1022,8191,718 bp+44.5%
tRNA-Leu (UUR)Transfer RNA2,8202,89374 bp+–
ND1Protein-coding gene2,8943,862969 bp+45.3%
tRNA-IleTransfer RNA3,8673,93670 bp+–
tRNA-GlnTransfer RNA3,9354,00571 bp−–
tRNA-MetTransfer RNA4,0054,07369 bp+–
ND2Protein-coding gene4,0745,1451,072 bp+48.0%
tRNA-TrpTransfer RNA5,1465,21772 bp+–
tRNA-AlaTransfer RNA5,2195,28769 bp−–
tRNA-AsnTransfer RNA5,2905,36374 bp−–
tRNA-CysTransfer RNA5,4025,46665 bp−–
tRNA-TyrTransfer RNA5,4675,53367 bp−–
COX1Protein-coding gene5,5407,1081,569 bp+44.9%
tRNA-Ser (UCN)Transfer RNA7,1327,20271 bp−–
tRNA-AspTransfer RNA7,2067,27974 bp+–
COX2Protein-coding gene7,2847,974691 bp+41.8%
tRNA-LysTransfer RNA7,9758,04874 bp+–
ATP8Protein-coding gene8,0548,221168 bp+44.1%
ATP6Protein-coding gene8,2128,894683 bp+44.7%
COX3Protein-coding gene8,8959,678784 bp+46.2%
tRNA-GlyTransfer RNA9,6799,75173 bp+–
ND3Protein-coding gene9,75210,100349 bp+48.4%
tRNA-ArgTransfer RNA10,10110,17070 bp+–
ND4LProtein-coding gene10,17110,467297 bp+50.8%
ND4Protein-coding gene10,46111,8411,381 bp+46.2%
tRNA-HisTransfer RNA11,84211,91069 bp+–
tRNA-Ser (AGY)Transfer RNA11,91111,97767 bp+–
tRNA-Leu (CUN)Transfer RNA11,98012,05273 bp+–
ND5Protein-coding gene12,05813,8991,842 bp+45.3%
ND6Protein-coding gene13,89614,417522 bp−49.2%
tRNA-GluTransfer RNA14,41814,48669 bp−–
CYTBProtein-coding gene14,49215,6291,138 bp+46.6%
tRNA-ThrTransfer RNA15,63015,70778 bp+–
tRNA-ProTransfer RNA15,73115,80171 bp−–
D-loopControl region15,80216,685884 bp–31.7%

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