Mustela erminea
Ermine
GC content
39.94%
Whole genome
Non-coding
1,091 bp
D-loop 1,034 bp
Where Ermine sits among 2,335 species
Whole-genome GC content against maximum lifespan. Ermine has the 1,389th longest lifespan of them.
- This species
- Other mammals
- Other classes
Base composition
Whole genome16,471 bp
- GC skew (G − C) / (G + C)
- −0.327
- AT skew (A − T) / (A + T)
- +0.113
Life history
- Maximum lifespan
- 12.5 years
- Adult weight
- 110.3 g
- Birth weight
- 2.3 g
- Basal metabolic rate
- 1.276 W
- Body temperature
- 39.6 °C
- Female sexual maturity
- 95 days
- Male sexual maturity
- 365 days
- Gestation or incubation
- 43 days
- Litter or clutch size
- 6.8
- Litters per year
- 1
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02193)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, small sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Unchanged since build 1
- In the database since
- build 1 (2015-07-01)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,471 bp
Protein-coding11,353 bp
12S rRNA960 bp
16S rRNA1,568 bp
All tRNA1,513 bp
D-loop1,034 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 955 bp | 42.83% | −0.423 | +0.066 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,042 bp | 35.99% | −0.520 | +0.196 | |||||
| COX1Cytochrome c oxidase subunit I | 1,545 bp | 40.97% | −0.197 | −0.013 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 38.60% | −0.326 | +0.100 | |||||
| ATP8ATP synthase F0 subunit 8 | 204 bp | 30.88% | −0.587 | +0.163 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 39.06% | −0.436 | +0.041 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 43.62% | −0.345 | +0.014 | |||||
| ND3NADH dehydrogenase subunit 3 | 347 bp | 36.89% | −0.359 | +0.087 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 39.73% | −0.390 | −0.050 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 40.78% | −0.434 | +0.118 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,830 bp | 39.18% | −0.445 | +0.125 | |||||
| ND6NADH dehydrogenase subunit 6 | 534 bp | 38.95% | −0.462 | +0.344 | |||||
| CYTBCytochrome b | 1,140 bp | 42.90% | −0.419 | +0.045 | |||||
| 12S rRNA12S ribosomal RNA | 960 bp | 40.10% | −0.122 | +0.259 | |||||
| 16S rRNA16S ribosomal RNA | 1,568 bp | 39.03% | −0.114 | +0.207 | |||||
| D-loopControl region (D-loop) | 1,034 bp | 43.33% | −0.335 | +0.055 |
Codon usage
Counts per codon, darker is more frequent3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU98
UUC139
Leu L15.8%
UUA130
UUG12
CUU57
CUC74
CUA283
CUG46
Ile I8.8%
AUU154
AUC182
Met M6.5%
AUA207
AUG39
Val V4.7%
GUU33
GUC31
GUA102
GUG13
Ser S7.4%
UCU41
UCC73
UCA108
UCG6
AGU16
AGC37
Pro P5.1%
CCU41
CCC66
CCA86
CCG2
Thr T8.4%
ACU67
ACC93
ACA149
ACG12
Ala A6.6%
GCU44
GCC106
GCA98
GCG4
Tyr Y3.4%
UAU51
UAC80
His H2.6%
CAU26
CAC73
Gln Q2.3%
CAA80
CAG8
Asn N4.1%
AAU43
AAC112
Lys K2.7%
AAA96
AAG5
Asp D1.8%
GAU24
GAC43
Glu E2.5%
GAA83
GAG13
Cys C0.6%
UGU8
UGC15
Trp W2.8%
UGA96
UGG9
Arg R1.7%
CGU6
CGC15
CGA41
CGG2
Gly G5.8%
GGU34
GGC53
GGA101
GGG31
Stop 0.2%
UAA7
UAG0
AGA1
AGG0
Genome map
38 annotated features in NC_025516.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (39.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 308 | 376 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 377 | 1,336 | 960 bp | + | 40.1% |
| tRNA-Val | Transfer RNA | 1,337 | 1,404 | 68 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,404 | 2,971 | 1,568 bp | + | 39.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,972 | 3,046 | 75 bp | + | – |
| ND1 | Protein-coding gene | 3,049 | 4,003 | 955 bp | + | 42.8% |
| tRNA-Ile | Transfer RNA | 4,004 | 4,073 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 4,071 | 4,144 | 74 bp | − | – |
| tRNA-Met | Transfer RNA | 4,146 | 4,215 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,216 | 5,257 | 1,042 bp | + | 36.0% |
| tRNA-Trp | Transfer RNA | 5,258 | 5,324 | 67 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,333 | 5,401 | 69 bp | + | – |
| tRNA-Asn | Transfer RNA | 5,403 | 5,475 | 73 bp | + | – |
| tRNA-Cys | Transfer RNA | 5,509 | 5,574 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,575 | 5,643 | 69 bp | − | – |
| COX1 | Protein-coding gene | 5,645 | 7,189 | 1,545 bp | + | 41.0% |
| tRNA-Ser (UCN) | Transfer RNA | 7,186 | 7,257 | 72 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,261 | 7,327 | 67 bp | + | – |
| COX2 | Protein-coding gene | 7,328 | 8,011 | 684 bp | + | 38.6% |
| tRNA-Lys | Transfer RNA | 8,015 | 8,081 | 67 bp | + | – |
| ATP8 | Protein-coding gene | 8,083 | 8,286 | 204 bp | + | 30.9% |
| ATP6 | Protein-coding gene | 8,244 | 8,924 | 681 bp | + | 39.1% |
| COX3 | Protein-coding gene | 8,924 | 9,707 | 784 bp | + | 43.6% |
| tRNA-Gly | Transfer RNA | 9,708 | 9,776 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,777 | 10,123 | 347 bp | + | 36.9% |
| tRNA-Arg | Transfer RNA | 10,124 | 10,191 | 68 bp | + | – |
| ND4L | Protein-coding gene | 10,192 | 10,488 | 297 bp | + | 39.7% |
| ND4 | Protein-coding gene | 10,482 | 11,859 | 1,378 bp | + | 40.8% |
| tRNA-His | Transfer RNA | 11,860 | 11,928 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,929 | 11,990 | 62 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,991 | 12,060 | 70 bp | + | – |
| ND5 | Protein-coding gene | 12,052 | 13,881 | 1,830 bp | + | 39.2% |
| ND6 | Protein-coding gene | 13,865 | 14,398 | 534 bp | − | 39.0% |
| tRNA-Glu | Transfer RNA | 14,399 | 14,467 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,472 | 15,611 | 1,140 bp | + | 42.9% |
| tRNA-Thr | Transfer RNA | 15,612 | 15,679 | 68 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,680 | 15,744 | 65 bp | − | – |
| D-loop | Control region | 15,745 | 307 | 1,034 bp | – | 43.3% |