MitoAge

Mustela nigripes

Black-footed ferret

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Maximum lifespan
9.4 yr
AnAge record
mtDNA size
16,556 bp
RefSeq NC_024942.1
GC content
39.93%
Whole genome
Non-coding
1,203 bp
D-loop 1,117 bp

Where Black-footed ferret sits among 2,335 species

Whole-genome GC content against maximum lifespan. Black-footed ferret has the 1,634th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Black-footed ferret
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,556 bp
GC skew (G − C) / (G + C)
−0.310
AT skew (A − T) / (A + T)
+0.095

Life history

Maximum lifespan
9.4 years
Adult weight
1 kg
Birth weight
7.4 g
Female sexual maturity
365 days
Male sexual maturity
365 days
Gestation or incubation
43 days
Litter or clutch size
3

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02197)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,556 bp
Protein-coding11,341 bp
12S rRNA955 bp
16S rRNA1,553 bp
All tRNA1,507 bp
D-loop1,117 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp30.5%28.3%11.8%29.3%41.11%−0.425+0.037
ND2NADH dehydrogenase subunit 21,042 bp37.3%26.2%9.2%27.3%36.47%−0.495+0.175
COX1Cytochrome c oxidase subunit I1,545 bp27.6%30.8%17.4%24.1%41.55%−0.162−0.054
COX2Cytochrome c oxidase subunit II684 bp32.5%27.6%14.0%25.9%39.91%−0.297+0.080
ATP8ATP synthase F0 subunit 8204 bp39.7%30.9%7.4%22.1%29.41%−0.500+0.125
ATP6ATP synthase F0 subunit 6681 bp31.0%28.0%11.3%29.7%40.97%−0.448+0.050
COX3Cytochrome c oxidase subunit III784 bp27.6%29.0%15.2%28.3%43.50%−0.302−0.025
ND3NADH dehydrogenase subunit 3346 bp32.9%28.6%12.1%26.3%38.44%−0.368+0.070
ND4LNADH dehydrogenase subunit 4L297 bp28.6%33.3%11.8%26.3%38.05%−0.381−0.076
ND4NADH dehydrogenase subunit 41,378 bp32.8%27.2%11.6%28.4%39.99%−0.419+0.093
ND5NADH dehydrogenase subunit 51,821 bp33.6%27.1%11.6%27.7%39.26%−0.410+0.107
ND6NADH dehydrogenase subunit 6531 bp42.4%21.1%9.4%27.1%36.54%−0.485+0.335
CYTBCytochrome b1,140 bp29.3%27.5%12.9%30.4%43.25%−0.404+0.032
12S rRNA12S ribosomal RNA955 bp37.5%23.2%17.6%21.7%39.27%−0.104+0.234
16S rRNA16S ribosomal RNA1,553 bp36.4%24.8%17.1%21.7%38.83%−0.118+0.189
D-loopControl region (D-loop)1,117 bp29.1%25.9%15.5%29.5%45.03%−0.312+0.059

Codon usage

Counts per codon, darker is more frequent

3,801 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU102
UUC134
Leu L15.9%
UUA124
UUG22
CUU69
CUC75
CUA270
CUG43
Ile I8.8%
AUU156
AUC177
Met M6.5%
AUA203
AUG44
Val V4.7%
GUU32
GUC40
GUA91
GUG16
Ser S7.4%
UCU58
UCC62
UCA101
UCG4
AGU21
AGC37
Pro P5.1%
CCU45
CCC64
CCA82
CCG2
Thr T8.5%
ACU79
ACC85
ACA145
ACG14
Ala A6.7%
GCU54
GCC102
GCA92
GCG6
Tyr Y3.4%
UAU52
UAC78
His H2.6%
CAU22
CAC75
Gln Q2.3%
CAA80
CAG8
Asn N3.9%
AAU57
AAC93
Lys K2.7%
AAA91
AAG10
Asp D1.8%
GAU21
GAC46
Glu E2.6%
GAA79
GAG18
Cys C0.7%
UGU13
UGC14
Trp W2.8%
UGA89
UGG16
Arg R1.7%
CGU5
CGC18
CGA38
CGG3
Gly G5.7%
GGU30
GGC49
GGA103
GGG34
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_024942.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA711,025955 bp+39.3%
tRNA-ValTransfer RNA1,0291,09668 bp+–
16S rRNARibosomal RNA1,1042,6561,553 bp+38.8%
tRNA-Leu (UUR)Transfer RNA2,6662,74075 bp+–
ND1Protein-coding gene2,7433,698956 bp+41.1%
tRNA-IleTransfer RNA3,6993,76769 bp+–
tRNA-GlnTransfer RNA3,7653,83874 bp−–
tRNA-MetTransfer RNA3,8403,90869 bp+–
ND2Protein-coding gene3,9094,9501,042 bp+36.5%
tRNA-TrpTransfer RNA4,9515,01767 bp+–
tRNA-AlaTransfer RNA5,0285,09669 bp+–
tRNA-AsnTransfer RNA5,0985,17073 bp+–
tRNA-CysTransfer RNA5,2045,27067 bp−–
tRNA-TyrTransfer RNA5,2725,33968 bp−–
COX1Protein-coding gene5,3416,8851,545 bp+41.6%
tRNA-Ser (UCN)Transfer RNA6,8836,95169 bp−–
tRNA-AspTransfer RNA6,9577,02367 bp+–
COX2Protein-coding gene7,0247,707684 bp+39.9%
tRNA-LysTransfer RNA7,7117,77767 bp+–
ATP8Protein-coding gene7,7797,982204 bp+29.4%
ATP6Protein-coding gene7,9408,620681 bp+41.0%
COX3Protein-coding gene8,6209,403784 bp+43.5%
tRNA-GlyTransfer RNA9,4049,47269 bp+–
ND3Protein-coding gene9,4739,818346 bp+38.4%
tRNA-ArgTransfer RNA9,8209,88768 bp+–
ND4LProtein-coding gene9,88810,184297 bp+38.1%
ND4Protein-coding gene10,17811,5551,378 bp+40.0%
tRNA-HisTransfer RNA11,55611,62469 bp+–
tRNA-Ser (AGY)Transfer RNA11,62511,68662 bp+–
tRNA-Leu (CUN)Transfer RNA11,68711,75670 bp+–
ND5Protein-coding gene11,75713,5771,821 bp+39.3%
ND6Protein-coding gene13,56114,091531 bp−36.5%
tRNA-GluTransfer RNA14,09514,16369 bp−–
CYTBProtein-coding gene14,16815,3071,140 bp+43.3%
tRNA-ThrTransfer RNA15,30815,37467 bp+–
tRNA-ProTransfer RNA15,37415,43966 bp−–
D-loopControl region15,44016,5561,117 bp–45.0%

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