MitoAge

Mustela putorius

European polecat

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Maximum lifespan
11.1 yr
AnAge record
mtDNA size
16,523 bp
RefSeq NC_020638.1
GC content
39.82%
Whole genome
Non-coding
1,138 bp
D-loop 1,081 bp

Where European polecat sits among 2,335 species

Whole-genome GC content against maximum lifespan. European polecat has the 1,479th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %European polecat
  • This species
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,523 bp
GC skew (G − C) / (G + C)
−0.308
AT skew (A − T) / (A + T)
+0.091

Life history

Maximum lifespan
11.1 years
Adult weight
809 g
Birth weight
9.5 g
Female sexual maturity
312 days
Male sexual maturity
322 days
Gestation or incubation
42 days
Litter or clutch size
7.5
Litters per year
1.5
Postnatal growth rate
0.0328 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02199)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,523 bp
Protein-coding11,353 bp
12S rRNA959 bp
16S rRNA1,570 bp
All tRNA1,517 bp
D-loop1,081 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp30.3%28.3%12.1%29.3%41.47%−0.414+0.034
ND2NADH dehydrogenase subunit 21,042 bp37.7%26.7%8.8%26.8%35.61%−0.504+0.171
COX1Cytochrome c oxidase subunit I1,545 bp27.3%30.7%17.7%24.3%42.01%−0.156−0.058
COX2Cytochrome c oxidase subunit II684 bp32.3%28.2%14.2%25.3%39.47%−0.281+0.068
ATP8ATP synthase F0 subunit 8204 bp40.2%30.4%6.9%22.5%29.41%−0.533+0.139
ATP6ATP synthase F0 subunit 6681 bp31.1%28.5%11.2%29.2%40.38%−0.447+0.044
COX3Cytochrome c oxidase subunit III784 bp27.4%28.1%15.4%29.1%44.52%−0.307−0.011
ND3NADH dehydrogenase subunit 3347 bp33.1%28.2%12.4%26.2%38.62%−0.358+0.080
ND4LNADH dehydrogenase subunit 4L297 bp28.3%33.0%12.1%26.6%38.72%−0.374−0.077
ND4NADH dehydrogenase subunit 41,378 bp32.8%27.3%11.5%28.4%39.91%−0.422+0.092
ND5NADH dehydrogenase subunit 51,830 bp33.5%27.2%11.6%27.7%39.34%−0.408+0.105
ND6NADH dehydrogenase subunit 6534 bp42.1%21.9%9.6%26.4%35.96%−0.469+0.316
CYTBCytochrome b1,140 bp29.3%27.7%12.9%30.1%42.98%−0.400+0.028
12S rRNA12S ribosomal RNA959 bp37.5%23.6%17.5%21.4%38.90%−0.099+0.229
16S rRNA16S ribosomal RNA1,570 bp36.5%25.0%17.2%21.3%38.54%−0.107+0.188
D-loopControl region (D-loop)1,081 bp29.1%26.6%15.1%29.1%44.22%−0.318+0.045

Codon usage

Counts per codon, darker is more frequent

3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU102
UUC133
Leu L16.0%
UUA128
UUG23
CUU74
CUC72
CUA270
CUG40
Ile I8.7%
AUU155
AUC177
Met M6.5%
AUA199
AUG49
Val V4.8%
GUU33
GUC41
GUA93
GUG15
Ser S7.4%
UCU51
UCC68
UCA101
UCG4
AGU19
AGC39
Pro P5.1%
CCU43
CCC65
CCA79
CCG6
Thr T8.4%
ACU81
ACC82
ACA144
ACG14
Ala A6.7%
GCU55
GCC102
GCA90
GCG7
Tyr Y3.5%
UAU52
UAC80
His H2.5%
CAU22
CAC75
Gln Q2.3%
CAA82
CAG6
Asn N3.9%
AAU56
AAC94
Lys K2.7%
AAA94
AAG8
Asp D1.8%
GAU22
GAC45
Glu E2.5%
GAA80
GAG17
Cys C0.7%
UGU11
UGC15
Trp W2.8%
UGA87
UGG18
Arg R1.7%
CGU6
CGC16
CGA38
CGG4
Gly G5.7%
GGU30
GGC48
GGA103
GGG34
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_020638.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,028959 bp+38.9%
tRNA-ValTransfer RNA1,0291,09668 bp+–
16S rRNARibosomal RNA1,0962,6651,570 bp+38.5%
tRNA-Leu (UUR)Transfer RNA2,6662,74075 bp+–
ND1Protein-coding gene2,7433,697955 bp+41.5%
tRNA-IleTransfer RNA3,6983,76770 bp+–
tRNA-GlnTransfer RNA3,7653,83874 bp−–
tRNA-MetTransfer RNA3,8403,90869 bp+–
ND2Protein-coding gene3,9094,9501,042 bp+35.6%
tRNA-TrpTransfer RNA4,9515,01767 bp+–
tRNA-AlaTransfer RNA5,0285,09669 bp+–
tRNA-AsnTransfer RNA5,0985,17073 bp+–
tRNA-CysTransfer RNA5,2025,26867 bp−–
tRNA-TyrTransfer RNA5,2685,34174 bp−–
COX1Protein-coding gene5,3436,8871,545 bp+42.0%
tRNA-Ser (UCN)Transfer RNA6,8846,95572 bp−–
tRNA-AspTransfer RNA6,9597,02567 bp+–
COX2Protein-coding gene7,0267,709684 bp+39.5%
tRNA-LysTransfer RNA7,7137,77967 bp+–
ATP8Protein-coding gene7,7817,984204 bp+29.4%
ATP6Protein-coding gene7,9428,622681 bp+40.4%
COX3Protein-coding gene8,6229,405784 bp+44.5%
tRNA-GlyTransfer RNA9,4069,47469 bp+–
ND3Protein-coding gene9,4759,821347 bp+38.6%
tRNA-ArgTransfer RNA9,8229,88968 bp+–
ND4LProtein-coding gene9,89010,186297 bp+38.7%
ND4Protein-coding gene10,18011,5571,378 bp+39.9%
tRNA-HisTransfer RNA11,55811,62669 bp+–
tRNA-Ser (AGY)Transfer RNA11,62711,68862 bp+–
tRNA-Leu (CUN)Transfer RNA11,68911,75870 bp+–
ND5Protein-coding gene11,75013,5791,830 bp+39.3%
ND6Protein-coding gene13,56314,096534 bp−36.0%
tRNA-GluTransfer RNA14,09714,16569 bp−–
CYTBProtein-coding gene14,17015,3091,140 bp+43.0%
tRNA-ThrTransfer RNA15,31015,37768 bp+–
tRNA-ProTransfer RNA15,37815,44265 bp−–
D-loopControl region15,44316,5231,081 bp–44.2%

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