MitoAge

Mustela sibirica

Siberian weasel

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Maximum lifespan
8.8 yr
AnAge record
mtDNA size
16,559 bp
RefSeq NC_020637.1
GC content
39.82%
Whole genome
Non-coding
1,179 bp
D-loop 1,120 bp

Where Siberian weasel sits among 2,335 species

Whole-genome GC content against maximum lifespan. Siberian weasel has the 1,699th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Siberian weasel
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,559 bp
GC skew (G − C) / (G + C)
−0.304
AT skew (A − T) / (A + T)
+0.093

Life history

Maximum lifespan
8.8 years
Adult weight
565 g
Gestation or incubation
29 days
Litter or clutch size
6

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02200)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,559 bp
Protein-coding11,353 bp
12S rRNA959 bp
16S rRNA1,569 bp
All tRNA1,513 bp
D-loop1,120 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp30.3%28.4%12.3%29.1%41.36%−0.408+0.032
ND2NADH dehydrogenase subunit 21,042 bp37.7%27.4%8.9%26.0%34.93%−0.489+0.159
COX1Cytochrome c oxidase subunit I1,545 bp27.4%30.6%17.8%24.3%42.07%−0.154−0.055
COX2Cytochrome c oxidase subunit II684 bp32.6%26.6%14.2%26.6%40.79%−0.305+0.101
ATP8ATP synthase F0 subunit 8204 bp39.2%30.4%7.8%22.5%30.39%−0.484+0.127
ATP6ATP synthase F0 subunit 6681 bp30.5%28.6%11.6%29.2%40.82%−0.432+0.032
COX3Cytochrome c oxidase subunit III784 bp27.7%28.8%15.4%28.1%43.50%−0.290−0.020
ND3NADH dehydrogenase subunit 3347 bp32.9%28.2%12.4%26.5%38.91%−0.363+0.075
ND4LNADH dehydrogenase subunit 4L297 bp29.0%31.3%11.8%27.9%39.73%−0.407−0.039
ND4NADH dehydrogenase subunit 41,378 bp32.8%28.1%11.7%27.4%39.12%−0.403+0.077
ND5NADH dehydrogenase subunit 51,830 bp33.9%26.7%11.6%27.8%39.34%−0.411+0.119
ND6NADH dehydrogenase subunit 6534 bp41.8%21.0%9.7%27.5%37.27%−0.477+0.331
CYTBCytochrome b1,140 bp29.4%28.2%12.6%29.8%42.46%−0.405+0.021
12S rRNA12S ribosomal RNA959 bp37.5%23.3%17.5%21.7%39.21%−0.106+0.235
16S rRNA16S ribosomal RNA1,569 bp36.6%25.6%17.1%20.7%37.80%−0.093+0.178
D-loopControl region (D-loop)1,120 bp28.8%25.4%15.6%30.1%45.71%−0.316+0.063

Codon usage

Counts per codon, darker is more frequent

3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.3%
UUU94
UUC144
Leu L15.8%
UUA128
UUG21
CUU75
CUC63
CUA275
CUG39
Ile I8.7%
AUU144
AUC186
Met M6.5%
AUA203
AUG45
Val V4.9%
GUU37
GUC35
GUA101
GUG14
Ser S7.4%
UCU55
UCC61
UCA104
UCG5
AGU19
AGC39
Pro P5.1%
CCU50
CCC60
CCA77
CCG7
Thr T8.3%
ACU77
ACC81
ACA148
ACG11
Ala A6.7%
GCU57
GCC100
GCA88
GCG10
Tyr Y3.5%
UAU58
UAC74
His H2.5%
CAU26
CAC71
Gln Q2.3%
CAA78
CAG10
Asn N3.9%
AAU46
AAC103
Lys K2.7%
AAA92
AAG10
Asp D1.8%
GAU23
GAC45
Glu E2.5%
GAA82
GAG15
Cys C0.7%
UGU12
UGC14
Trp W2.8%
UGA86
UGG19
Arg R1.7%
CGU6
CGC16
CGA39
CGG3
Gly G5.7%
GGU34
GGC46
GGA98
GGG38
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_020637.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,028959 bp+39.2%
tRNA-ValTransfer RNA1,0291,09668 bp+–
16S rRNARibosomal RNA1,0962,6641,569 bp+37.8%
tRNA-Leu (UUR)Transfer RNA2,6652,73975 bp+–
ND1Protein-coding gene2,7423,696955 bp+41.4%
tRNA-IleTransfer RNA3,6973,76670 bp+–
tRNA-GlnTransfer RNA3,7643,83774 bp−–
tRNA-MetTransfer RNA3,8393,90769 bp+–
ND2Protein-coding gene3,9084,9491,042 bp+34.9%
tRNA-TrpTransfer RNA4,9505,01667 bp+–
tRNA-AlaTransfer RNA5,0275,09569 bp+–
tRNA-AsnTransfer RNA5,0975,16973 bp+–
tRNA-CysTransfer RNA5,2035,26967 bp−–
tRNA-TyrTransfer RNA5,2695,33870 bp−–
COX1Protein-coding gene5,3406,8841,545 bp+42.1%
tRNA-Ser (UCN)Transfer RNA6,8816,95272 bp−–
tRNA-AspTransfer RNA6,9567,02267 bp+–
COX2Protein-coding gene7,0237,706684 bp+40.8%
tRNA-LysTransfer RNA7,7107,77667 bp+–
ATP8Protein-coding gene7,7787,981204 bp+30.4%
ATP6Protein-coding gene7,9398,619681 bp+40.8%
COX3Protein-coding gene8,6199,402784 bp+43.5%
tRNA-GlyTransfer RNA9,4039,47169 bp+–
ND3Protein-coding gene9,4729,818347 bp+38.9%
tRNA-ArgTransfer RNA9,8199,88668 bp+–
ND4LProtein-coding gene9,88710,183297 bp+39.7%
ND4Protein-coding gene10,17711,5541,378 bp+39.1%
tRNA-HisTransfer RNA11,55511,62369 bp+–
tRNA-Ser (AGY)Transfer RNA11,62411,68562 bp+–
tRNA-Leu (CUN)Transfer RNA11,68611,75570 bp+–
ND5Protein-coding gene11,74713,5761,830 bp+39.3%
ND6Protein-coding gene13,56014,093534 bp−37.3%
tRNA-GluTransfer RNA14,09414,16269 bp−–
CYTBProtein-coding gene14,16715,3061,140 bp+42.5%
tRNA-ThrTransfer RNA15,30715,37468 bp+–
tRNA-ProTransfer RNA15,37515,43965 bp−–
D-loopControl region15,44016,5591,120 bp–45.7%

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