Myrmecobius fasciatus
Numbat
GC content
38.89%
Whole genome
Non-coding
1,473 bp
Including the D-loop
Where Numbat sits among 2,335 species
Whole-genome GC content against maximum lifespan. Numbat has the 1,498th longest lifespan of them.
- This species
- Other mammals
- Other classes
Base composition
Whole genome16,813 bp
- GC skew (G − C) / (G + C)
- −0.279
- AT skew (A − T) / (A + T)
- +0.078
Life history
- Maximum lifespan
- 11 years
- Adult weight
- 471.5 g
- Basal metabolic rate
- 0.907 W
- Body temperature
- 32.5 °C
- Female sexual maturity
- 350 days
- Male sexual maturity
- 2 years
- Gestation or incubation
- 14 days
- Litter or clutch size
- 4
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02485)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, small sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Unchanged since build 1
- In the database since
- build 1 (2015-07-01)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,813 bp
Protein-coding11,332 bp
12S rRNA949 bp
16S rRNA1,576 bp
All tRNA1,499 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 957 bp | 40.13% | −0.354 | +0.082 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,044 bp | 38.60% | −0.529 | +0.129 | |||||
| COX1Cytochrome c oxidase subunit I | 1,539 bp | 40.55% | −0.163 | −0.040 | |||||
| COX2Cytochrome c oxidase subunit II | 688 bp | 39.54% | −0.184 | +0.005 | |||||
| ATP8ATP synthase F0 subunit 8 | 210 bp | 36.67% | −0.195 | −0.023 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 39.50% | −0.465 | +0.029 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 42.35% | −0.277 | −0.044 | |||||
| ND3NADH dehydrogenase subunit 3 | 346 bp | 43.06% | −0.369 | −0.056 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 36.70% | −0.376 | +0.011 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 39.33% | −0.384 | +0.045 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,818 bp | 38.17% | −0.383 | +0.091 | |||||
| ND6NADH dehydrogenase subunit 6 | 498 bp | 39.56% | −0.533 | +0.395 | |||||
| CYTBCytochrome b | 1,146 bp | 43.81% | −0.363 | +0.037 | |||||
| 12S rRNA12S ribosomal RNA | 949 bp | 42.89% | −0.066 | +0.225 | |||||
| 16S rRNA16S ribosomal RNA | 1,576 bp | 37.31% | −0.102 | +0.188 |
Codon usage
Counts per codon, darker is more frequent3,794 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU96
UUC134
Leu L16.2%
UUA121
UUG23
CUU84
CUC60
CUA291
CUG36
Ile I8.8%
AUU172
AUC162
Met M6.0%
AUA187
AUG42
Val V4.8%
GUU40
GUC27
GUA92
GUG24
Ser S7.3%
UCU47
UCC49
UCA119
UCG9
AGU19
AGC34
Pro P5.1%
CCU49
CCC44
CCA86
CCG15
Thr T8.4%
ACU65
ACC81
ACA158
ACG14
Ala A6.8%
GCU72
GCC84
GCA94
GCG7
Tyr Y3.4%
UAU65
UAC63
His H2.8%
CAU36
CAC72
Gln Q2.3%
CAA64
CAG22
Asn N3.7%
AAU46
AAC96
Lys K2.5%
AAA83
AAG11
Asp D1.8%
GAU30
GAC39
Glu E2.4%
GAA72
GAG20
Cys C1.0%
UGU9
UGC29
Trp W2.8%
UGA90
UGG16
Arg R1.7%
CGU9
CGC12
CGA42
CGG3
Gly G5.8%
GGU44
GGC63
GGA75
GGG37
Stop 0.2%
UAA4
UAG4
AGA0
AGG1
Genome map
37 annotated features in NC_011949.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (38.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 172 | 240 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 241 | 1,189 | 949 bp | + | 42.9% |
| tRNA-Val | Transfer RNA | 1,191 | 1,259 | 69 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,260 | 2,835 | 1,576 bp | + | 37.3% |
| tRNA-Leu (UUR) | Transfer RNA | 2,837 | 2,910 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,912 | 3,868 | 957 bp | + | 40.1% |
| tRNA-Ile | Transfer RNA | 3,868 | 3,935 | 68 bp | − | – |
| tRNA-Gln | Transfer RNA | 3,933 | 4,003 | 71 bp | + | – |
| tRNA-Met | Transfer RNA | 4,003 | 4,071 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,073 | 5,116 | 1,044 bp | + | 38.6% |
| tRNA-Ala | Transfer RNA | 5,118 | 5,186 | 69 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,192 | 5,257 | 66 bp | − | – |
| tRNA-Trp | Transfer RNA | 5,264 | 5,333 | 70 bp | + | – |
| tRNA-Asn | Transfer RNA | 5,411 | 5,482 | 72 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,487 | 5,550 | 64 bp | − | – |
| COX1 | Protein-coding gene | 5,552 | 7,090 | 1,539 bp | + | 40.6% |
| tRNA-Ser (UCN) | Transfer RNA | 7,096 | 7,165 | 70 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,169 | 7,238 | 70 bp | + | – |
| COX2 | Protein-coding gene | 7,240 | 7,927 | 688 bp | + | 39.5% |
| tRNA-Lys | Transfer RNA | 7,922 | 7,984 | 63 bp | + | – |
| ATP8 | Protein-coding gene | 7,985 | 8,194 | 210 bp | + | 36.7% |
| ATP6 | Protein-coding gene | 8,149 | 8,829 | 681 bp | + | 39.5% |
| COX3 | Protein-coding gene | 8,829 | 9,612 | 784 bp | + | 42.4% |
| tRNA-Gly | Transfer RNA | 9,613 | 9,680 | 68 bp | + | – |
| ND3 | Protein-coding gene | 9,681 | 10,026 | 346 bp | + | 43.1% |
| tRNA-Arg | Transfer RNA | 10,027 | 10,095 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,096 | 10,392 | 297 bp | + | 36.7% |
| ND4 | Protein-coding gene | 10,386 | 11,763 | 1,378 bp | + | 39.3% |
| tRNA-His | Transfer RNA | 11,764 | 11,832 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,832 | 11,890 | 59 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,891 | 11,961 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,953 | 13,770 | 1,818 bp | + | 38.2% |
| ND6 | Protein-coding gene | 13,771 | 14,268 | 498 bp | − | 39.6% |
| tRNA-Glu | Transfer RNA | 14,272 | 14,340 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,344 | 15,489 | 1,146 bp | + | 43.8% |
| tRNA-Thr | Transfer RNA | 15,490 | 15,557 | 68 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,562 | 15,628 | 67 bp | − | – |