MitoAge

Mystacina tuberculata

New Zealand lesser short-tailed bat

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Maximum lifespan
7.6 yr
AnAge record
mtDNA size
16,784 bp
RefSeq NC_006925.1
GC content
39.89%
Whole genome
Non-coding
1,403 bp
D-loop 1,321 bp

Where New Zealand lesser short-tailed bat sits among 2,335 species

Whole-genome GC content against maximum lifespan. New Zealand lesser short-tailed bat has the 1,796th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %New Zealand lesser short-tailed bat
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,784 bp
GC skew (G − C) / (G + C)
−0.264
AT skew (A − T) / (A + T)
+0.056

Life history

Maximum lifespan
7.6 years
Adult weight
23.5 g
Birth weight
3.2 g
Litter or clutch size
1
Litters per year
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02335)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,784 bp
Protein-coding11,343 bp
12S rRNA969 bp
16S rRNA1,568 bp
All tRNA1,507 bp
D-loop1,321 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp31.0%28.8%12.7%27.4%40.13%−0.365+0.037
ND2NADH dehydrogenase subunit 21,044 bp35.6%25.9%9.7%28.8%38.51%−0.498+0.159
COX1Cytochrome c oxidase subunit I1,545 bp26.0%32.2%17.9%23.9%41.88%−0.144−0.107
COX2Cytochrome c oxidase subunit II684 bp32.2%29.1%14.9%23.8%38.74%−0.230+0.050
ATP8ATP synthase F0 subunit 8204 bp36.3%28.4%8.3%27.0%35.29%−0.528+0.121
ATP6ATP synthase F0 subunit 6681 bp28.9%30.2%11.9%28.9%40.82%−0.417−0.022
COX3Cytochrome c oxidase subunit III784 bp25.8%30.9%16.3%27.0%43.37%−0.247−0.090
ND3NADH dehydrogenase subunit 3348 bp31.0%29.6%12.6%26.7%39.37%−0.358+0.024
ND4LNADH dehydrogenase subunit 4L297 bp30.0%32.3%13.8%23.9%37.71%−0.268−0.038
ND4NADH dehydrogenase subunit 41,378 bp31.3%29.8%12.6%26.3%38.82%−0.353+0.025
ND5NADH dehydrogenase subunit 51,821 bp31.8%29.2%12.1%27.0%39.04%−0.381+0.043
ND6NADH dehydrogenase subunit 6528 bp40.5%23.3%7.8%28.4%36.17%−0.571+0.270
CYTBCytochrome b1,140 bp28.2%28.1%14.8%28.9%43.77%−0.323+0.002
12S rRNA12S ribosomal RNA969 bp35.4%23.8%17.8%22.4%40.40%−0.116+0.195
16S rRNA16S ribosomal RNA1,568 bp36.9%25.3%17.5%20.4%37.88%−0.077+0.187
D-loopControl region (D-loop)1,321 bp27.4%28.3%19.5%24.8%44.29%−0.118−0.016

Codon usage

Counts per codon, darker is more frequent

3,803 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU99
UUC131
Leu L15.9%
UUA119
UUG26
CUU62
CUC80
CUA260
CUG56
Ile I8.8%
AUU176
AUC157
Met M6.5%
AUA190
AUG56
Val V5.3%
GUU49
GUC45
GUA82
GUG25
Ser S7.5%
UCU67
UCC65
UCA82
UCG9
AGU23
AGC41
Pro P5.0%
CCU51
CCC61
CCA66
CCG14
Thr T7.9%
ACU68
ACC77
ACA135
ACG19
Ala A6.9%
GCU66
GCC91
GCA92
GCG12
Tyr Y3.7%
UAU72
UAC67
His H2.3%
CAU37
CAC52
Gln Q2.4%
CAA80
CAG10
Asn N3.9%
AAU61
AAC87
Lys K2.6%
AAA83
AAG14
Asp D1.8%
GAU36
GAC32
Glu E2.6%
GAA73
GAG25
Cys C0.7%
UGU8
UGC17
Trp W2.8%
UGA92
UGG13
Arg R1.7%
CGU16
CGC11
CGA35
CGG4
Gly G5.7%
GGU40
GGC64
GGA90
GGG21
Stop 0.3%
UAA8
UAG2
AGA1
AGG0

Genome map

38 annotated features in NC_006925.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,038969 bp+40.4%
tRNA-ValTransfer RNA1,0391,10971 bp+–
16S rRNARibosomal RNA1,1102,6771,568 bp+37.9%
tRNA-Leu (UUR)Transfer RNA2,6782,75275 bp+–
ND1Protein-coding gene2,7553,711957 bp+40.1%
tRNA-IleTransfer RNA3,7113,77969 bp+–
tRNA-GlnTransfer RNA3,7773,84973 bp−–
tRNA-MetTransfer RNA3,8503,91869 bp+–
ND2Protein-coding gene3,9194,9621,044 bp+38.5%
tRNA-TrpTransfer RNA4,9615,02868 bp+–
tRNA-AlaTransfer RNA5,0335,10169 bp−–
tRNA-AsnTransfer RNA5,1035,17573 bp−–
tRNA-CysTransfer RNA5,2095,27264 bp−–
tRNA-TyrTransfer RNA5,2745,34067 bp−–
COX1Protein-coding gene5,3426,8861,545 bp+41.9%
tRNA-Ser (UCN)Transfer RNA6,8846,95269 bp−–
tRNA-AspTransfer RNA6,9607,02667 bp+–
COX2Protein-coding gene7,0287,711684 bp+38.7%
tRNA-LysTransfer RNA7,7157,78571 bp+–
ATP8Protein-coding gene7,7877,990204 bp+35.3%
ATP6Protein-coding gene7,9488,628681 bp+40.8%
COX3Protein-coding gene8,6289,411784 bp+43.4%
tRNA-GlyTransfer RNA9,4129,48069 bp+–
ND3Protein-coding gene9,4819,828348 bp+39.4%
tRNA-ArgTransfer RNA9,8299,89668 bp+–
ND4LProtein-coding gene9,89710,193297 bp+37.7%
ND4Protein-coding gene10,18711,5641,378 bp+38.8%
tRNA-HisTransfer RNA11,56511,63268 bp+–
tRNA-Ser (AGY)Transfer RNA11,63311,69260 bp+–
tRNA-Leu (CUN)Transfer RNA11,69311,76270 bp+–
ND5Protein-coding gene11,76313,5831,821 bp+39.0%
ND6Protein-coding gene13,56714,094528 bp−36.2%
tRNA-GluTransfer RNA14,09514,16268 bp−–
CYTBProtein-coding gene14,16815,3071,140 bp+43.8%
tRNA-ThrTransfer RNA15,30815,37568 bp+–
tRNA-ProTransfer RNA15,37515,44066 bp−–
D-loopControl region15,44116,7611,321 bp–44.3%

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