MitoAge

Nannospalax ehrenbergi

Palestine mole rat

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Maximum lifespan
20.2 yr
AnAge record
mtDNA size
16,408 bp
RefSeq NC_005315.1
GC content
38.78%
Whole genome
Non-coding
1,059 bp
D-loop 980 bp

Where Palestine mole rat sits among 2,335 species

Whole-genome GC content against maximum lifespan. Palestine mole rat has the 886th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Palestine mole rat
  • This species
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  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,408 bp
GC skew (G − C) / (G + C)
−0.333
AT skew (A − T) / (A + T)
+0.128

Life history

Maximum lifespan
20.2 years
Adult weight
160 g
Basal metabolic rate
0.585 W
Body temperature
35.6 °C
Gestation or incubation
29 days
Litter or clutch size
3
Litters per year
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03197)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,408 bp
Protein-coding11,333 bp
12S rRNA957 bp
16S rRNA1,576 bp
All tRNA1,486 bp
D-loop980 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1946 bp32.8%26.1%11.2%29.9%41.12%−0.455+0.113
ND2NADH dehydrogenase subunit 21,042 bp34.8%27.3%8.7%29.2%37.91%−0.539+0.122
COX1Cytochrome c oxidase subunit I1,545 bp29.8%29.0%17.1%24.1%41.23%−0.171+0.013
COX2Cytochrome c oxidase subunit II684 bp33.8%25.7%14.8%25.7%40.50%−0.271+0.135
ATP8ATP synthase F0 subunit 8204 bp39.2%26.0%6.9%27.9%34.80%−0.606+0.203
ATP6ATP synthase F0 subunit 6681 bp33.6%25.3%10.7%30.4%41.12%−0.479+0.142
COX3Cytochrome c oxidase subunit III784 bp29.0%27.9%15.4%27.7%43.11%−0.284+0.018
ND3NADH dehydrogenase subunit 3348 bp32.2%27.6%12.4%27.9%40.23%−0.386+0.077
ND4LNADH dehydrogenase subunit 4L297 bp31.6%32.7%10.4%25.3%35.69%−0.415−0.016
ND4NADH dehydrogenase subunit 41,377 bp35.2%28.0%10.3%26.5%36.82%−0.440+0.115
ND5NADH dehydrogenase subunit 51,827 bp35.4%26.8%9.6%28.2%37.77%−0.493+0.138
ND6NADH dehydrogenase subunit 6525 bp43.4%19.0%6.3%31.2%37.52%−0.665+0.390
CYTBCytochrome b1,140 bp32.5%26.8%12.2%28.4%40.61%−0.400+0.096
12S rRNA12S ribosomal RNA957 bp37.6%23.3%17.8%21.3%39.08%−0.091+0.235
16S rRNA16S ribosomal RNA1,576 bp38.5%23.6%16.7%21.2%37.88%−0.119+0.240
D-loopControl region (D-loop)980 bp32.4%32.6%13.0%22.0%35.00%−0.259−0.002

Codon usage

Counts per codon, darker is more frequent

3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.3%
UUU98
UUC140
Leu L15.8%
UUA104
UUG17
CUU70
CUC67
CUA324
CUG17
Ile I9.1%
AUU161
AUC186
Met M5.6%
AUA184
AUG29
Val V4.9%
GUU36
GUC19
GUA117
GUG16
Ser S7.6%
UCU29
UCC59
UCA143
UCG5
AGU16
AGC38
Pro P5.1%
CCU25
CCC33
CCA129
CCG7
Thr T8.7%
ACU29
ACC110
ACA182
ACG8
Ala A6.3%
GCU67
GCC90
GCA74
GCG10
Tyr Y3.1%
UAU45
UAC74
His H2.7%
CAU27
CAC74
Gln Q2.2%
CAA76
CAG6
Asn N4.6%
AAU57
AAC117
Lys K2.6%
AAA92
AAG6
Asp D1.7%
GAU28
GAC38
Glu E2.6%
GAA82
GAG15
Cys C0.7%
UGU12
UGC16
Trp W2.7%
UGA91
UGG12
Arg R1.6%
CGU10
CGC12
CGA38
CGG2
Gly G5.8%
GGU49
GGC36
GGA102
GGG33
Stop 0.3%
UAA9
UAG0
AGA0
AGG1

Genome map

38 annotated features in NC_005315.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (38.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16767 bp+–
12S rRNARibosomal RNA681,024957 bp+39.1%
tRNA-ValTransfer RNA1,0251,09066 bp+–
16S rRNARibosomal RNA1,0912,6661,576 bp+37.9%
tRNA-Leu (UUR)Transfer RNA2,6672,74175 bp+–
ND1Protein-coding gene2,7513,696946 bp+41.1%
tRNA-IleTransfer RNA3,6973,76468 bp+–
tRNA-GlnTransfer RNA3,7623,83271 bp−–
tRNA-MetTransfer RNA3,8403,90970 bp+–
ND2Protein-coding gene3,9104,9511,042 bp+37.9%
tRNA-TrpTransfer RNA4,9525,01867 bp+–
tRNA-AlaTransfer RNA5,0225,09069 bp−–
tRNA-AsnTransfer RNA5,0915,16373 bp−–
tRNA-CysTransfer RNA5,1965,25964 bp−–
tRNA-TyrTransfer RNA5,2615,32464 bp−–
COX1Protein-coding gene5,3266,8701,545 bp+41.2%
tRNA-Ser (UCN)Transfer RNA6,8686,93669 bp−–
tRNA-AspTransfer RNA6,9407,00667 bp+–
COX2Protein-coding gene7,0077,690684 bp+40.5%
tRNA-LysTransfer RNA7,6927,75564 bp+–
ATP8Protein-coding gene7,7577,960204 bp+34.8%
ATP6Protein-coding gene7,9188,598681 bp+41.1%
COX3Protein-coding gene8,6019,384784 bp+43.1%
tRNA-GlyTransfer RNA9,3859,45268 bp+–
ND3Protein-coding gene9,4549,801348 bp+40.2%
tRNA-ArgTransfer RNA9,8059,87268 bp+–
ND4LProtein-coding gene9,87310,169297 bp+35.7%
ND4Protein-coding gene10,16311,5391,377 bp+36.8%
tRNA-HisTransfer RNA11,54711,61468 bp+–
tRNA-Ser (AGY)Transfer RNA11,61511,67359 bp+–
tRNA-Leu (CUN)Transfer RNA11,67211,74271 bp+–
ND5Protein-coding gene11,74313,5691,827 bp+37.8%
ND6Protein-coding gene13,55314,077525 bp−37.5%
tRNA-GluTransfer RNA14,07814,14669 bp−–
CYTBProtein-coding gene14,15115,2901,140 bp+40.6%
tRNA-ThrTransfer RNA15,29515,36268 bp+–
tRNA-ProTransfer RNA15,36315,42866 bp−–
D-loopControl region15,42916,408980 bp–35.0%

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