Nemipterus randalli
Randall's threadfin bream
GC content
43.35%
Whole genome
Non-coding
960 bp
D-loop 894 bp
Where Randall's threadfin bream sits among 2,335 species
Whole-genome GC content against maximum lifespan. Randall's threadfin bream has the 2,235th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,642 bp
- GC skew (G − C) / (G + C)
- −0.237
- AT skew (A − T) / (A + T)
- +0.015
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,642 bp
Protein-coding11,407 bp
12S rRNA997 bp
16S rRNA1,731 bp
All tRNA1,547 bp
D-loop894 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 43.59% | −0.327 | −0.069 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 44.17% | −0.407 | −0.007 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 43.52% | −0.156 | −0.116 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 42.55% | −0.286 | +0.003 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 41.67% | −0.486 | +0.082 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 42.98% | −0.367 | −0.056 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 46.50% | −0.244 | −0.033 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 44.70% | −0.256 | −0.119 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 46.80% | −0.338 | −0.063 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 44.03% | −0.266 | −0.087 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 42.85% | −0.348 | +0.018 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 43.10% | −0.387 | +0.407 | |||||
| CYTBCytochrome b | 1,141 bp | 44.61% | −0.312 | −0.085 | |||||
| 12S rRNA12S ribosomal RNA | 997 bp | 49.05% | −0.088 | +0.157 | |||||
| 16S rRNA16S ribosomal RNA | 1,731 bp | 42.46% | −0.099 | +0.169 | |||||
| D-loopControl region (D-loop) | 894 bp | 31.99% | −0.056 | 0.000 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU97
UUC135
Leu L16.2%
UUA133
UUG22
CUU150
CUC106
CUA166
CUG41
Ile I7.5%
AUU187
AUC100
Met M4.6%
AUA110
AUG65
Val V6.2%
GUU65
GUC67
GUA78
GUG26
Ser S6.4%
UCU70
UCC55
UCA56
UCG10
AGU15
AGC39
Pro P5.7%
CCU83
CCC64
CCA59
CCG10
Thr T7.7%
ACU67
ACC100
ACA118
ACG8
Ala A9.0%
GCU82
GCC120
GCA113
GCG26
Tyr Y3.1%
UAU39
UAC79
His H2.8%
CAU39
CAC69
Gln Q2.5%
CAA87
CAG9
Asn N3.0%
AAU48
AAC67
Lys K2.0%
AAA67
AAG8
Asp D2.1%
GAU29
GAC50
Glu E2.4%
GAA78
GAG14
Cys C0.8%
UGU9
UGC22
Trp W3.1%
UGA104
UGG15
Arg R2.1%
CGU7
CGC12
CGA49
CGG12
Gly G6.4%
GGU29
GGC87
GGA82
GGG46
Stop 0.2%
UAA5
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_062624.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (43.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,065 | 997 bp | + | 49.1% |
| tRNA-Val | Transfer RNA | 1,066 | 1,137 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,138 | 2,868 | 1,731 bp | + | 42.5% |
| tRNA-Leu (UUR) | Transfer RNA | 2,869 | 2,942 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,943 | 3,917 | 975 bp | + | 43.6% |
| tRNA-Ile | Transfer RNA | 3,922 | 3,991 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,991 | 4,061 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,061 | 4,130 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,131 | 5,176 | 1,046 bp | + | 44.2% |
| tRNA-Trp | Transfer RNA | 5,177 | 5,247 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,248 | 5,316 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,318 | 5,390 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,433 | 5,498 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,499 | 5,569 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,571 | 7,121 | 1,551 bp | + | 43.5% |
| tRNA-Ser (UCN) | Transfer RNA | 7,123 | 7,193 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,196 | 7,266 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,274 | 7,964 | 691 bp | + | 42.6% |
| tRNA-Lys | Transfer RNA | 7,965 | 8,039 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 8,041 | 8,208 | 168 bp | + | 41.7% |
| ATP6 | Protein-coding gene | 8,199 | 8,882 | 684 bp | + | 43.0% |
| COX3 | Protein-coding gene | 8,882 | 9,666 | 785 bp | + | 46.5% |
| tRNA-Gly | Transfer RNA | 9,667 | 9,737 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,738 | 10,086 | 349 bp | + | 44.7% |
| tRNA-Arg | Transfer RNA | 10,087 | 10,155 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,156 | 10,452 | 297 bp | + | 46.8% |
| ND4 | Protein-coding gene | 10,446 | 11,826 | 1,381 bp | + | 44.0% |
| tRNA-His | Transfer RNA | 11,827 | 11,895 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,896 | 11,962 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,965 | 12,037 | 73 bp | + | – |
| ND5 | Protein-coding gene | 12,038 | 13,876 | 1,839 bp | + | 42.9% |
| ND6 | Protein-coding gene | 13,873 | 14,394 | 522 bp | − | 43.1% |
| tRNA-Glu | Transfer RNA | 14,396 | 14,464 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,469 | 15,609 | 1,141 bp | + | 44.6% |
| tRNA-Thr | Transfer RNA | 15,610 | 15,680 | 71 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,680 | 15,748 | 69 bp | − | – |
| D-loop | Control region | 15,749 | 16,642 | 894 bp | – | 32.0% |