Nemopilema nomurai
Nomura's jellyfish
GC content
27.92%
Whole genome
Non-coding
2,721 bp
Including the D-loop
Where Nomura's jellyfish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Nomura's jellyfish has the 2,320th longest lifespan of them.
- This species
- All other species
Base composition
Whole genome17,024 bp
- GC skew (G − C) / (G + C)
- +0.049
- AT skew (A − T) / (A + T)
- −0.085
About this record
- Lifespan source
- SeaLifeBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,024 bp
Protein-coding11,346 bp
12S rRNA928 bp
16S rRNA1,699 bp
All tRNA392 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 960 bp | 29.58% | +0.049 | −0.112 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,080 bp | 25.56% | +0.130 | −0.109 | |||||
| COX1Cytochrome c oxidase subunit I | 1,593 bp | 33.77% | −0.030 | +0.118 | |||||
| COX2Cytochrome c oxidase subunit II | 744 bp | 30.11% | +0.143 | −0.031 | |||||
| ATP8ATP synthase F0 subunit 8 | 204 bp | 22.06% | +0.111 | +0.082 | |||||
| ATP6ATP synthase F0 subunit 6 | 702 bp | 26.92% | +0.175 | −0.205 | |||||
| COX3Cytochrome c oxidase subunit III | 786 bp | 32.95% | +0.135 | −0.214 | |||||
| ND3NADH dehydrogenase subunit 3 | 336 bp | 25.30% | +0.106 | −0.092 | |||||
| ND4LNADH dehydrogenase subunit 4L | 252 bp | 22.62% | +0.123 | −0.036 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,332 bp | 27.63% | −0.054 | −0.129 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,698 bp | 27.68% | −0.013 | −0.174 | |||||
| ND6NADH dehydrogenase subunit 6 | 528 bp | 24.81% | −0.038 | −0.083 | |||||
| CYTBCytochrome b | 1,131 bp | 30.15% | −0.050 | −0.096 | |||||
| 12S rRNA12S ribosomal RNA | 928 bp | 29.53% | +0.058 | +0.107 | |||||
| 16S rRNA16S ribosomal RNA | 1,699 bp | 28.31% | −0.064 | −0.146 |
Codon usage
Counts per codon, darker is more frequent3,782 codons in all protein-coding genes. Grouped with the Invertebrate mitochondrial code (NCBI table 5).
Phe F8.1%
UUU258
UUC49
Leu L14.7%
UUA390
UUG40
CUU46
CUC10
CUA65
CUG6
Ile I5.8%
AUU192
AUC26
Met M9.4%
AUA253
AUG102
Val V6.2%
GUU103
GUC15
GUA106
GUG12
Ser S10.9%
UCU142
UCC24
UCA92
UCG6
AGU68
AGC13
AGA59
AGG10
Pro P3.8%
CCU96
CCC15
CCA30
CCG3
Thr T4.7%
ACU79
ACC19
ACA78
ACG1
Ala A5.9%
GCU101
GCC26
GCA86
GCG10
Tyr Y4.4%
UAU129
UAC39
His H2.1%
CAU61
CAC20
Gln Q2.1%
CAA64
CAG14
Asn N3.5%
AAU96
AAC36
Lys K3.1%
AAA100
AAG16
Asp D2.5%
GAU74
GAC19
Glu E2.7%
GAA92
GAG10
Cys C0.7%
UGU23
UGC4
Trp W2.3%
UGA67
UGG21
Arg R0.1%
CGU1
CGC0
CGA1
CGG0
Gly G6.6%
GGU94
GGC9
GGA120
GGG28
Stop 0.3%
UAA12
UAG1
Genome map
21 annotated features in NC_035740.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA6
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (27.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 21 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| COX2 | Protein-coding gene | 1,620 | 2,363 | 744 bp | + | 30.1% |
| tRNA-Trp | Transfer RNA | 2,368 | 2,437 | 70 bp | + | – |
| ATP8 | Protein-coding gene | 2,443 | 2,646 | 204 bp | + | 22.1% |
| ATP6 | Protein-coding gene | 2,649 | 3,350 | 702 bp | + | 26.9% |
| COX3 | Protein-coding gene | 3,351 | 4,136 | 786 bp | + | 33.0% |
| tRNA-Met | Transfer RNA | 4,144 | 4,214 | 71 bp | + | – |
| tRNA-Val | Transfer RNA | 4,241 | 4,311 | 71 bp | − | – |
| ND2 | Protein-coding gene | 4,456 | 5,535 | 1,080 bp | + | 25.6% |
| tRNA-Arg | Transfer RNA | 5,451 | 5,509 | 59 bp | + | – |
| ND5 | Protein-coding gene | 5,657 | 7,354 | 1,698 bp | + | 27.7% |
| 12S rRNA | Ribosomal RNA | 7,352 | 8,279 | 928 bp | + | 29.5% |
| ND6 | Protein-coding gene | 8,306 | 8,833 | 528 bp | + | 24.8% |
| ND3 | Protein-coding gene | 8,838 | 9,173 | 336 bp | + | 25.3% |
| ND4L | Protein-coding gene | 9,215 | 9,466 | 252 bp | + | 22.6% |
| ND1 | Protein-coding gene | 9,478 | 10,437 | 960 bp | + | 29.6% |
| ND4 | Protein-coding gene | 10,546 | 11,877 | 1,332 bp | + | 27.6% |
| CYTB | Protein-coding gene | 11,885 | 13,015 | 1,131 bp | + | 30.2% |
| tRNA-Glu | Transfer RNA | 13,900 | 13,962 | 63 bp | + | – |
| tRNA-Asn | Transfer RNA | 14,918 | 14,975 | 58 bp | + | – |
| 16S rRNA | Ribosomal RNA | 15,186 | 16,884 | 1,699 bp | − | 28.3% |
| COX1 | Protein-coding gene | 16,980 | 1,548 | 1,593 bp | − | 33.8% |