MitoAge

Neofelis nebulosa

Clouded leopard

Add to compare Download FASTA
Maximum lifespan
19.8 yr
AnAge record
mtDNA size
16,844 bp
RefSeq NC_008450.1
GC content
41.15%
Whole genome
Non-coding
1,466 bp
D-loop 1,401 bp

Where Clouded leopard sits among 2,335 species

Whole-genome GC content against maximum lifespan. Clouded leopard has the 957th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Clouded leopard
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,844 bp
GC skew (G − C) / (G + C)
−0.281
AT skew (A − T) / (A + T)
+0.078

Life history

Maximum lifespan
19.8 years
Adult weight
19.5 kg
Birth weight
170 g
Female sexual maturity
2 years
Male sexual maturity
3 years
Gestation or incubation
89 days
Litter or clutch size
2

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02126)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,844 bp
Protein-coding11,339 bp
12S rRNA958 bp
16S rRNA1,573 bp
All tRNA1,511 bp
D-loop1,401 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp30.2%26.7%12.7%30.4%43.10%−0.413+0.063
ND2NADH dehydrogenase subunit 21,042 bp35.3%25.0%10.3%29.4%39.64%−0.482+0.170
COX1Cytochrome c oxidase subunit I1,545 bp25.8%31.4%19.0%23.8%42.85%−0.112−0.099
COX2Cytochrome c oxidase subunit II684 bp32.6%27.5%13.6%26.3%39.91%−0.319+0.085
ATP8ATP synthase F0 subunit 8204 bp36.8%28.4%10.3%24.5%34.80%−0.408+0.128
ATP6ATP synthase F0 subunit 6681 bp28.3%28.5%13.8%29.4%43.17%−0.361−0.003
COX3Cytochrome c oxidase subunit III784 bp27.3%29.1%16.2%27.4%43.62%−0.257−0.032
ND3NADH dehydrogenase subunit 3347 bp30.0%28.8%13.0%28.2%41.21%−0.371+0.020
ND4LNADH dehydrogenase subunit 4L297 bp30.3%31.6%12.8%25.3%38.05%−0.327−0.022
ND4NADH dehydrogenase subunit 41,378 bp31.3%28.1%12.5%28.1%40.57%−0.385+0.055
ND5NADH dehydrogenase subunit 51,821 bp31.0%28.2%12.2%28.6%40.75%−0.402+0.047
ND6NADH dehydrogenase subunit 6528 bp38.1%22.0%11.6%28.4%39.96%−0.422+0.268
CYTBCytochrome b1,140 bp28.0%28.0%14.2%29.8%44.04%−0.3550.000
12S rRNA12S ribosomal RNA958 bp35.8%22.5%18.4%23.3%41.65%−0.118+0.227
16S rRNA16S ribosomal RNA1,573 bp36.6%24.1%18.2%21.1%39.29%−0.074+0.206
D-loopControl region (D-loop)1,401 bp30.5%25.3%16.3%27.8%44.11%−0.259+0.093

Codon usage

Counts per codon, darker is more frequent

3,800 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU113
UUC116
Leu L15.6%
UUA107
UUG20
CUU65
CUC98
CUA235
CUG69
Ile I8.3%
AUU142
AUC173
Met M6.5%
AUA186
AUG61
Val V5.2%
GUU43
GUC38
GUA88
GUG28
Ser S7.3%
UCU53
UCC59
UCA99
UCG12
AGU18
AGC37
Pro P5.3%
CCU54
CCC78
CCA59
CCG9
Thr T8.3%
ACU73
ACC96
ACA133
ACG15
Ala A6.8%
GCU58
GCC111
GCA80
GCG11
Tyr Y3.7%
UAU70
UAC69
His H2.6%
CAU31
CAC67
Gln Q2.4%
CAA75
CAG16
Asn N3.9%
AAU56
AAC92
Lys K2.7%
AAA90
AAG14
Asp D1.8%
GAU25
GAC43
Glu E2.5%
GAA70
GAG26
Cys C0.6%
UGU7
UGC16
Trp W2.7%
UGA84
UGG20
Arg R1.8%
CGU4
CGC14
CGA44
CGG5
Gly G5.7%
GGU33
GGC61
GGA88
GGG35
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_008450.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (41.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA89896770 bp+–
12S rRNARibosomal RNA9681,925958 bp+41.7%
tRNA-ValTransfer RNA1,9261,99368 bp+–
16S rRNARibosomal RNA1,9943,5661,573 bp+39.3%
tRNA-Leu (UUR)Transfer RNA3,5673,64175 bp+–
ND1Protein-coding gene3,6444,599956 bp+43.1%
tRNA-IleTransfer RNA4,6004,66869 bp+–
tRNA-GlnTransfer RNA4,6664,73974 bp−–
tRNA-MetTransfer RNA4,7414,80969 bp+–
ND2Protein-coding gene4,8105,8511,042 bp+39.6%
tRNA-TrpTransfer RNA5,8525,91968 bp+–
tRNA-AlaTransfer RNA5,9356,00369 bp−–
tRNA-AsnTransfer RNA6,0056,07773 bp−–
tRNA-CysTransfer RNA6,1106,17566 bp−–
tRNA-TyrTransfer RNA6,1766,24267 bp−–
COX1Protein-coding gene6,2447,7881,545 bp+42.9%
tRNA-Ser (UCN)Transfer RNA7,7867,85469 bp−–
tRNA-AspTransfer RNA7,8617,92969 bp+–
COX2Protein-coding gene7,9308,613684 bp+39.9%
tRNA-LysTransfer RNA8,6178,68468 bp+–
ATP8Protein-coding gene8,6868,889204 bp+34.8%
ATP6Protein-coding gene8,8479,527681 bp+43.2%
COX3Protein-coding gene9,52710,310784 bp+43.6%
tRNA-GlyTransfer RNA10,31110,37969 bp+–
ND3Protein-coding gene10,38010,726347 bp+41.2%
tRNA-ArgTransfer RNA10,72710,79569 bp+–
ND4LProtein-coding gene10,79611,092297 bp+38.1%
ND4Protein-coding gene11,08612,4631,378 bp+40.6%
tRNA-HisTransfer RNA12,46412,53269 bp+–
tRNA-Ser (AGY)Transfer RNA12,53312,59159 bp+–
tRNA-Leu (CUN)Transfer RNA12,59212,66170 bp+–
ND5Protein-coding gene12,66214,4821,821 bp+40.8%
ND6Protein-coding gene14,46614,993528 bp−40.0%
tRNA-GluTransfer RNA14,99415,06269 bp−–
CYTBProtein-coding gene15,06616,2051,140 bp+44.0%
tRNA-ThrTransfer RNA16,20616,27368 bp+–
tRNA-ProTransfer RNA16,27416,34067 bp−–
D-loopControl region16,3418971,401 bp–44.1%

Downloads