MitoAge

Neophoca cinerea

Australian sea lion

Add to compare Download FASTA
Maximum lifespan
24.1 yr
AnAge record
mtDNA size
16,736 bp
RefSeq NC_008419.1
GC content
41.03%
Whole genome
Non-coding
1,332 bp
D-loop 1,272 bp

Where Australian sea lion sits among 2,335 species

Whole-genome GC content against maximum lifespan. Australian sea lion has the 676th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Australian sea lion
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,736 bp
GC skew (G − C) / (G + C)
−0.309
AT skew (A − T) / (A + T)
+0.122

Life history

Maximum lifespan
24.1 years
Adult weight
190 kg
Birth weight
7.1 kg
Female sexual maturity
3 years
Male sexual maturity
6 years
Gestation or incubation
258 days
Litter or clutch size
1
Litters per year
0.7

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02216)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,736 bp
Protein-coding11,351 bp
12S rRNA964 bp
16S rRNA1,577 bp
All tRNA1,520 bp
D-loop1,272 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp30.3%25.4%13.4%30.9%44.31%−0.396+0.088
ND2NADH dehydrogenase subunit 21,044 bp36.7%25.6%10.2%27.6%37.74%−0.462+0.178
COX1Cytochrome c oxidase subunit I1,545 bp27.3%28.9%17.7%26.1%43.75%−0.192−0.029
COX2Cytochrome c oxidase subunit II685 bp33.9%26.9%13.4%25.8%39.27%−0.316+0.115
ATP8ATP synthase F0 subunit 8204 bp38.7%25.5%8.8%27.0%35.78%−0.507+0.206
ATP6ATP synthase F0 subunit 6681 bp28.8%28.2%13.4%29.7%43.03%−0.379+0.010
COX3Cytochrome c oxidase subunit III784 bp27.6%28.3%15.2%29.0%44.13%−0.312−0.014
ND3NADH dehydrogenase subunit 3348 bp31.6%25.9%11.8%30.7%42.53%−0.446+0.100
ND4LNADH dehydrogenase subunit 4L297 bp29.3%30.3%12.8%27.6%40.40%−0.367−0.017
ND4NADH dehydrogenase subunit 41,379 bp33.1%27.1%11.2%28.6%39.81%−0.439+0.099
ND5NADH dehydrogenase subunit 51,827 bp33.2%26.2%11.7%28.8%40.56%−0.422+0.118
ND6NADH dehydrogenase subunit 6528 bp42.6%18.8%10.6%28.0%38.64%−0.451+0.389
CYTBCytochrome b1,140 bp30.1%26.0%14.0%29.9%43.95%−0.361+0.074
12S rRNA12S ribosomal RNA964 bp37.2%21.7%16.8%24.3%41.08%−0.182+0.264
16S rRNA16S ribosomal RNA1,577 bp38.1%23.4%17.5%21.0%38.49%−0.091+0.239
D-loopControl region (D-loop)1,272 bp32.3%25.9%14.9%27.0%41.82%−0.289+0.111

Codon usage

Counts per codon, darker is more frequent

3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU80
UUC148
Leu L15.9%
UUA83
UUG22
CUU74
CUC75
CUA297
CUG54
Ile I8.5%
AUU133
AUC190
Met M6.8%
AUA205
AUG54
Val V4.6%
GUU26
GUC34
GUA96
GUG20
Ser S7.3%
UCU46
UCC67
UCA97
UCG18
AGU17
AGC33
Pro P5.3%
CCU37
CCC80
CCA72
CCG11
Thr T8.5%
ACU54
ACC108
ACA149
ACG13
Ala A6.8%
GCU49
GCC104
GCA84
GCG21
Tyr Y3.3%
UAU67
UAC60
His H2.7%
CAU29
CAC74
Gln Q2.3%
CAA73
CAG13
Asn N4.1%
AAU55
AAC101
Lys K2.6%
AAA88
AAG10
Asp D1.8%
GAU31
GAC37
Glu E2.5%
GAA76
GAG21
Cys C0.6%
UGU9
UGC15
Trp W2.7%
UGA92
UGG11
Arg R1.7%
CGU7
CGC9
CGA42
CGG6
Gly G5.8%
GGU30
GGC58
GGA105
GGG26
Stop 0.2%
UAA6
UAG2
AGA1
AGG0

Genome map

38 annotated features in NC_008419.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (41.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17373 bp+–
12S rRNARibosomal RNA741,037964 bp+41.1%
tRNA-ValTransfer RNA1,0381,10467 bp+–
16S rRNARibosomal RNA1,1052,6811,577 bp+38.5%
tRNA-Leu (UUR)Transfer RNA2,6822,75776 bp+–
ND1Protein-coding gene2,7603,716957 bp+44.3%
tRNA-IleTransfer RNA3,7163,78570 bp+–
tRNA-GlnTransfer RNA3,7833,85674 bp−–
tRNA-MetTransfer RNA3,8583,92669 bp+–
ND2Protein-coding gene3,9274,9701,044 bp+37.7%
tRNA-TrpTransfer RNA4,9695,03668 bp+–
tRNA-AlaTransfer RNA5,0475,11569 bp−–
tRNA-AsnTransfer RNA5,1175,18973 bp−–
tRNA-CysTransfer RNA5,2235,29068 bp−–
tRNA-TyrTransfer RNA5,2915,35868 bp−–
COX1Protein-coding gene5,3606,9041,545 bp+43.8%
tRNA-Ser (UCN)Transfer RNA6,9026,97069 bp−–
tRNA-AspTransfer RNA6,9787,04467 bp+–
COX2Protein-coding gene7,0457,729685 bp+39.3%
tRNA-LysTransfer RNA7,7307,79869 bp+–
ATP8Protein-coding gene7,8008,003204 bp+35.8%
ATP6Protein-coding gene7,9618,641681 bp+43.0%
COX3Protein-coding gene8,6419,424784 bp+44.1%
tRNA-GlyTransfer RNA9,4259,49470 bp+–
ND3Protein-coding gene9,4959,842348 bp+42.5%
tRNA-ArgTransfer RNA9,8429,91069 bp+–
ND4LProtein-coding gene9,91110,207297 bp+40.4%
ND4Protein-coding gene10,20111,5791,379 bp+39.8%
tRNA-HisTransfer RNA11,57911,64769 bp+–
tRNA-Ser (AGY)Transfer RNA11,64811,70659 bp+–
tRNA-Leu (CUN)Transfer RNA11,70711,77670 bp+–
ND5Protein-coding gene11,77713,6031,827 bp+40.6%
ND6Protein-coding gene13,58714,114528 bp−38.6%
tRNA-GluTransfer RNA14,11514,18369 bp−–
CYTBProtein-coding gene14,18815,3271,140 bp+44.0%
tRNA-ThrTransfer RNA15,32815,39972 bp+–
tRNA-ProTransfer RNA15,39915,46466 bp−–
D-loopControl region15,46516,7361,272 bp–41.8%

Downloads