Oedalechilus labeo
Boxlip mullet
GC content
44.52%
Whole genome
Non-coding
1,530 bp
D-loop 1,420 bp
Where Boxlip mullet sits among 2,335 species
Whole-genome GC content against maximum lifespan. Boxlip mullet has the 1,581st longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome17,216 bp
- GC skew (G − C) / (G + C)
- −0.292
- AT skew (A − T) / (A + T)
- +0.029
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,216 bp
Protein-coding11,447 bp
12S rRNA960 bp
16S rRNA1,721 bp
All tRNA1,558 bp
D-loop1,420 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 45.74% | −0.354 | −0.059 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 48.80% | −0.518 | +0.021 | |||||
| COX1Cytochrome c oxidase subunit I | 1,584 bp | 45.27% | −0.199 | −0.103 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 43.42% | −0.280 | −0.018 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 45.83% | −0.481 | −0.055 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 45.03% | −0.461 | −0.053 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 46.17% | −0.287 | −0.043 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 46.42% | −0.333 | −0.187 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 49.83% | −0.365 | −0.128 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 45.69% | −0.372 | −0.043 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,851 bp | 44.14% | −0.439 | −0.008 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 48.08% | −0.450 | +0.410 | |||||
| CYTBCytochrome b | 1,138 bp | 44.99% | −0.367 | −0.099 | |||||
| 12S rRNA12S ribosomal RNA | 960 bp | 48.44% | −0.097 | +0.131 | |||||
| 16S rRNA16S ribosomal RNA | 1,721 bp | 44.51% | −0.110 | +0.185 | |||||
| D-loopControl region (D-loop) | 1,420 bp | 32.61% | −0.184 | +0.141 |
Codon usage
Counts per codon, darker is more frequent3,821 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU117
UUC124
Leu L17.5%
UUA106
UUG21
CUU145
CUC182
CUA168
CUG47
Ile I7.5%
AUU148
AUC137
Met M3.7%
AUA99
AUG43
Val V5.5%
GUU52
GUC71
GUA68
GUG20
Ser S6.6%
UCU51
UCC80
UCA62
UCG4
AGU13
AGC41
Pro P5.6%
CCU75
CCC88
CCA43
CCG8
Thr T7.9%
ACU56
ACC127
ACA110
ACG10
Ala A9.2%
GCU78
GCC130
GCA130
GCG12
Tyr Y3.1%
UAU51
UAC69
His H2.5%
CAU34
CAC63
Gln Q2.6%
CAA91
CAG8
Asn N2.9%
AAU31
AAC81
Lys K2.0%
AAA67
AAG8
Asp D1.8%
GAU19
GAC51
Glu E2.7%
GAA86
GAG17
Cys C0.8%
UGU8
UGC21
Trp W3.1%
UGA104
UGG14
Arg R2.1%
CGU10
CGC23
CGA38
CGG10
Gly G6.4%
GGU46
GGC90
GGA69
GGG39
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_017893.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,029 | 960 bp | + | 48.4% |
| tRNA-Val | Transfer RNA | 1,030 | 1,101 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,102 | 2,822 | 1,721 bp | + | 44.5% |
| tRNA-Leu (UUR) | Transfer RNA | 2,823 | 2,896 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,897 | 3,871 | 975 bp | + | 45.7% |
| tRNA-Ile | Transfer RNA | 3,876 | 3,945 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,944 | 4,014 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,014 | 4,083 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,084 | 5,128 | 1,045 bp | + | 48.8% |
| tRNA-Trp | Transfer RNA | 5,129 | 5,202 | 74 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,204 | 5,273 | 70 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,275 | 5,347 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,379 | 5,443 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,444 | 5,510 | 67 bp | − | – |
| COX1 | Protein-coding gene | 5,518 | 7,101 | 1,584 bp | + | 45.3% |
| tRNA-Ser (UCN) | Transfer RNA | 7,111 | 7,181 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,185 | 7,257 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,262 | 7,952 | 691 bp | + | 43.4% |
| tRNA-Lys | Transfer RNA | 7,953 | 8,026 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 8,028 | 8,195 | 168 bp | + | 45.8% |
| ATP6 | Protein-coding gene | 8,186 | 8,869 | 684 bp | + | 45.0% |
| COX3 | Protein-coding gene | 8,869 | 9,652 | 784 bp | + | 46.2% |
| tRNA-Gly | Transfer RNA | 9,653 | 9,726 | 74 bp | + | – |
| ND3 | Protein-coding gene | 9,727 | 10,075 | 349 bp | + | 46.4% |
| tRNA-Arg | Transfer RNA | 10,076 | 10,144 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,145 | 10,441 | 297 bp | + | 49.8% |
| ND4 | Protein-coding gene | 10,435 | 11,815 | 1,381 bp | + | 45.7% |
| tRNA-His | Transfer RNA | 11,816 | 11,886 | 71 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,888 | 11,954 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,957 | 12,029 | 73 bp | + | – |
| ND5 | Protein-coding gene | 12,033 | 13,883 | 1,851 bp | + | 44.1% |
| ND6 | Protein-coding gene | 13,880 | 14,401 | 522 bp | − | 48.1% |
| tRNA-Glu | Transfer RNA | 14,402 | 14,470 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,475 | 15,612 | 1,138 bp | + | 45.0% |
| tRNA-Thr | Transfer RNA | 15,613 | 15,686 | 74 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,726 | 15,796 | 71 bp | − | – |
| D-loop | Control region | 15,797 | 17,216 | 1,420 bp | – | 32.6% |