Onychomys leucogaster
Northern grasshopper mouse
GC content
37.33%
Whole genome
Non-coding
1,001 bp
D-loop 708 bp
Where Northern grasshopper mouse sits among 2,335 species
Whole-genome GC content against maximum lifespan. Northern grasshopper mouse has the 1,960th longest lifespan of them.
- This species
- Other mammals
- Other classes
Base composition
Whole genome16,370 bp
- GC skew (G − C) / (G + C)
- −0.310
- AT skew (A − T) / (A + T)
- +0.108
Life history
- Maximum lifespan
- 5.6 years
- Adult weight
- 32.5 g
- Birth weight
- 2.6 g
- Female sexual maturity
- 100 days
- Male sexual maturity
- 114 days
- Gestation or incubation
- 31 days
- Litter or clutch size
- 4
- Litters per year
- 2.5
- Postnatal growth rate
- 0.0634 per day
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02910)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, tiny sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,370 bp
Protein-coding11,342 bp
12S rRNA954 bp
16S rRNA1,568 bp
All tRNA1,518 bp
D-loop708 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 957 bp | 39.71% | −0.411 | +0.106 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,036 bp | 34.17% | −0.588 | +0.194 | |||||
| COX1Cytochrome c oxidase subunit I | 1,545 bp | 39.94% | −0.196 | −0.011 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 38.45% | −0.285 | +0.116 | |||||
| ATP8ATP synthase F0 subunit 8 | 204 bp | 35.29% | −0.583 | +0.212 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 38.33% | −0.448 | +0.057 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 41.71% | −0.272 | +0.033 | |||||
| ND3NADH dehydrogenase subunit 3 | 347 bp | 37.18% | −0.380 | +0.018 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 35.35% | −0.333 | −0.031 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 37.66% | −0.449 | +0.104 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,814 bp | 35.34% | −0.451 | +0.108 | |||||
| ND6NADH dehydrogenase subunit 6 | 524 bp | 38.36% | −0.582 | +0.375 | |||||
| CYTBCytochrome b | 1,144 bp | 38.99% | −0.318 | +0.066 | |||||
| 12S rRNA12S ribosomal RNA | 954 bp | 37.32% | −0.067 | +0.201 | |||||
| 16S rRNA16S ribosomal RNA | 1,568 bp | 37.63% | −0.058 | +0.213 | |||||
| D-loopControl region (D-loop) | 708 bp | 37.71% | −0.281 | −0.029 |
Codon usage
Counts per codon, darker is more frequent3,795 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU116
UUC114
Leu L15.1%
UUA115
UUG16
CUU73
CUC66
CUA278
CUG24
Ile I9.6%
AUU212
AUC151
Met M6.8%
AUA223
AUG35
Val V4.5%
GUU39
GUC17
GUA93
GUG21
Ser S8.0%
UCU47
UCC58
UCA142
UCG7
AGU11
AGC40
Pro P5.3%
CCU26
CCC47
CCA124
CCG5
Thr T8.1%
ACU49
ACC81
ACA172
ACG4
Ala A6.3%
GCU54
GCC88
GCA94
GCG2
Tyr Y3.3%
UAU59
UAC65
His H2.3%
CAU30
CAC59
Gln Q2.1%
CAA75
CAG6
Asn N4.7%
AAU58
AAC119
Lys K2.7%
AAA99
AAG4
Asp D1.7%
GAU26
GAC40
Glu E2.5%
GAA74
GAG22
Cys C0.8%
UGU10
UGC22
Trp W2.7%
UGA93
UGG10
Arg R1.7%
CGU6
CGC11
CGA47
CGG1
Gly G5.5%
GGU25
GGC21
GGA122
GGG41
Stop 0.2%
UAA5
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_029760.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (37.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 16 | 85 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 86 | 1,039 | 954 bp | + | 37.3% |
| tRNA-Val | Transfer RNA | 1,040 | 1,108 | 69 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,172 | 2,739 | 1,568 bp | + | 37.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,740 | 2,816 | 77 bp | + | – |
| ND1 | Protein-coding gene | 2,816 | 3,772 | 957 bp | + | 39.7% |
| tRNA-Ile | Transfer RNA | 3,770 | 3,840 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,837 | 3,907 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,911 | 3,979 | 69 bp | + | – |
| ND2 | Protein-coding gene | 3,980 | 5,015 | 1,036 bp | + | 34.2% |
| tRNA-Trp | Transfer RNA | 5,016 | 5,081 | 66 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,084 | 5,152 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,156 | 5,225 | 70 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,257 | 5,326 | 70 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,327 | 5,395 | 69 bp | − | – |
| COX1 | Protein-coding gene | 5,397 | 6,941 | 1,545 bp | + | 39.9% |
| tRNA-Ser (UCN) | Transfer RNA | 6,938 | 7,008 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,010 | 7,079 | 70 bp | + | – |
| COX2 | Protein-coding gene | 7,080 | 7,763 | 684 bp | + | 38.5% |
| tRNA-Lys | Transfer RNA | 7,765 | 7,830 | 66 bp | + | – |
| ATP8 | Protein-coding gene | 7,831 | 8,034 | 204 bp | + | 35.3% |
| ATP6 | Protein-coding gene | 7,992 | 8,672 | 681 bp | + | 38.3% |
| COX3 | Protein-coding gene | 8,672 | 9,455 | 784 bp | + | 41.7% |
| tRNA-Gly | Transfer RNA | 9,455 | 9,525 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,525 | 9,871 | 347 bp | + | 37.2% |
| tRNA-Arg | Transfer RNA | 9,875 | 9,943 | 69 bp | + | – |
| ND4L | Protein-coding gene | 9,945 | 10,241 | 297 bp | + | 35.4% |
| ND4 | Protein-coding gene | 10,235 | 11,612 | 1,378 bp | + | 37.7% |
| tRNA-His | Transfer RNA | 11,613 | 11,680 | 68 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,681 | 11,740 | 60 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,738 | 11,809 | 72 bp | + | – |
| ND5 | Protein-coding gene | 11,809 | 13,622 | 1,814 bp | + | 35.3% |
| ND6 | Protein-coding gene | 13,621 | 14,144 | 524 bp | − | 38.4% |
| tRNA-Glu | Transfer RNA | 14,144 | 14,214 | 71 bp | − | – |
| CYTB | Protein-coding gene | 14,219 | 15,362 | 1,144 bp | + | 39.0% |
| tRNA-Thr | Transfer RNA | 15,362 | 15,432 | 71 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,431 | 15,497 | 67 bp | − | – |
| D-loop | Control region | 15,562 | 16,269 | 708 bp | – | 37.7% |