Oreochromis mossambicus

Mozambique mouth-breeder

Maximum lifespan

11 yr

AnAge record

mtDNA size

16,641 bp

RefSeq NC_007231.1

GC content

45.62%

Whole genome

Non-coding

984 bp

Including the D-loop

Where Mozambique mouth-breeder sits among 2,335 species

Whole-genome GC content against maximum lifespan. Mozambique mouth-breeder has the 1,487th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,641 bp

GC skew (G − C) / (G + C): −0.314
AT skew (A − T) / (A + T): +0.031

Life history

Maximum lifespan: 11 years
Adult weight: 621.5 g
Female sexual maturity: 171 days
Male sexual maturity: 293 days

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 04148)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,641 bp

Protein-coding11,524 bp

12S rRNA941 bp

16S rRNA1,697 bp

All tRNA1,557 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Oreochromis mossambicus genes

ND1NADH dehydrogenase subunit 1	975 bp	24.9%	28.4%	13.9%	32.7%	46.67%	−0.402	−0.065
ND2NADH dehydrogenase subunit 2	1,056 bp	26.6%	26.0%	11.6%	35.7%	47.35%	−0.508	+0.011
COX1Cytochrome c oxidase subunit I	1,602 bp	25.0%	29.0%	17.8%	28.2%	46.01%	−0.227	−0.073
COX2Cytochrome c oxidase subunit II	691 bp	28.2%	26.8%	16.1%	28.9%	45.01%	−0.286	+0.026
ATP8ATP synthase F0 subunit 8	168 bp	31.0%	23.8%	11.3%	33.9%	45.24%	−0.500	+0.130
ATP6ATP synthase F0 subunit 6	675 bp	24.9%	31.6%	13.2%	30.4%	43.56%	−0.395	−0.118
COX3Cytochrome c oxidase subunit III	840 bp	26.0%	28.0%	16.0%	30.1%	46.07%	−0.307	−0.038
ND3NADH dehydrogenase subunit 3	351 bp	21.4%	31.9%	14.0%	32.8%	46.72%	−0.402	−0.198
ND4LNADH dehydrogenase subunit 4L	297 bp	19.9%	29.3%	14.8%	36.0%	50.84%	−0.417	−0.192
ND4NADH dehydrogenase subunit 4	1,390 bp	27.1%	26.9%	13.5%	32.5%	46.04%	−0.413	+0.003
ND5NADH dehydrogenase subunit 5	1,844 bp	28.0%	27.4%	12.6%	31.9%	44.58%	−0.433	+0.010
ND6NADH dehydrogenase subunit 6	522 bp	38.7%	13.0%	10.5%	37.7%	48.28%	−0.563	+0.496
CYTBCytochrome b	1,135 bp	23.8%	29.4%	13.6%	33.2%	46.78%	−0.420	−0.106
12S rRNA12S ribosomal RNA	941 bp	30.4%	20.3%	22.0%	27.3%	49.31%	−0.108	+0.199
16S rRNA16S ribosomal RNA	1,697 bp	32.9%	21.1%	19.8%	26.2%	45.96%	−0.138	+0.219

Codon usage

Counts per codon, darker is more frequent

Gene

3,847 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%

UUU108

UUC138

Leu L16.5%

UUA72

UUG32

CUU146

CUC189

CUA161

CUG35

Ile I7.6%

AUU172

AUC120

Met M3.9%

AUA99

AUG50

Val V5.1%

GUU64

GUC56

GUA51

GUG27

Ser S6.8%

UCU46

UCC96

UCA53

UCG9

AGU23

AGC35

Pro P6.0%

CCU66

CCC104

CCA54

CCG7

Thr T8.0%

ACU64

ACC128

ACA108

ACG8

Ala A8.3%

GCU58

GCC151

GCA98

GCG14

Tyr Y3.0%

UAU49

UAC68

His H3.0%

CAU25

CAC89

Gln Q2.7%

CAA87

CAG15

Asn N3.1%

AAU43

AAC77

Lys K2.2%

AAA81

AAG4

Asp D1.9%

GAU16

GAC59

Glu E2.8%

GAA87

GAG20

Cys C0.8%

UGU13

UGC17

Trp W3.1%

UGA102

UGG18

Arg R2.2%

CGU14

CGC23

CGA42

CGG6

Gly G6.3%

GGU44

GGC81

GGA77

GGG39

Stop 0.2%

UAA7

UAG2

AGA0

AGG0

Genome map

37 annotated features in NC_007231.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (45.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 37 features as a table

Annotated features of Oreochromis mossambicus (NC_007231.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	69	69 bp	+	–
12S rRNA	Ribosomal RNA	70	1,010	941 bp	+	49.3%
tRNA-Val	Transfer RNA	1,011	1,083	73 bp	+	–
16S rRNA	Ribosomal RNA	1,084	2,780	1,697 bp	+	46.0%
tRNA-Leu (UUR)	Transfer RNA	2,781	2,854	74 bp	+	–
ND1	Protein-coding gene	2,855	3,829	975 bp	+	46.7%
tRNA-Ile	Transfer RNA	3,833	3,902	70 bp	+	–
tRNA-Gln	Transfer RNA	3,902	3,974	73 bp	−	–
tRNA-Met	Transfer RNA	3,974	4,042	69 bp	+	–
ND2	Protein-coding gene	4,043	5,098	1,056 bp	+	47.4%
tRNA-Trp	Transfer RNA	5,098	5,169	72 bp	+	–
tRNA-Ala	Transfer RNA	5,171	5,239	69 bp	−	–
tRNA-Asn	Transfer RNA	5,241	5,312	72 bp	−	–
tRNA-Cys	Transfer RNA	5,345	5,410	66 bp	−	–
tRNA-Tyr	Transfer RNA	5,411	5,480	70 bp	−	–
COX1	Protein-coding gene	5,482	7,083	1,602 bp	+	46.0%
tRNA-Ser (UCN)	Transfer RNA	7,084	7,154	71 bp	−	–
tRNA-Asp	Transfer RNA	7,158	7,230	73 bp	+	–
COX2	Protein-coding gene	7,236	7,926	691 bp	+	45.0%
tRNA-Lys	Transfer RNA	7,927	8,000	74 bp	+	–
ATP8	Protein-coding gene	8,002	8,169	168 bp	+	45.2%
ATP6	Protein-coding gene	8,160	8,834	675 bp	+	43.6%
COX3	Protein-coding gene	8,834	9,673	840 bp	+	46.1%
tRNA-Gly	Transfer RNA	9,618	9,689	72 bp	+	–
ND3	Protein-coding gene	9,690	10,040	351 bp	+	46.7%
tRNA-Arg	Transfer RNA	10,039	10,110	72 bp	+	–
ND4L	Protein-coding gene	10,108	10,404	297 bp	+	50.8%
ND4	Protein-coding gene	10,398	11,787	1,390 bp	+	46.0%
tRNA-His	Transfer RNA	11,788	11,856	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,857	11,923	67 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,928	12,000	73 bp	+	–
ND5	Protein-coding gene	12,001	13,844	1,844 bp	+	44.6%
ND6	Protein-coding gene	13,841	14,362	522 bp	−	48.3%
tRNA-Glu	Transfer RNA	14,363	14,431	69 bp	+	–
CYTB	Protein-coding gene	14,436	15,570	1,135 bp	+	46.8%
tRNA-Thr	Transfer RNA	15,577	15,648	72 bp	+	–
tRNA-Pro	Transfer RNA	15,649	15,718	70 bp	−	–