Oxyeleotris marmorata
Marble goby
GC content
46.34%
Whole genome
Non-coding
927 bp
D-loop 856 bp
Where Marble goby sits among 2,335 species
Whole-genome GC content against maximum lifespan. Marble goby has the 878th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,525 bp
- GC skew (G − C) / (G + C)
- −0.332
- AT skew (A − T) / (A + T)
- +0.070
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in captivity
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,525 bp
Protein-coding11,410 bp
12S rRNA954 bp
16S rRNA1,683 bp
All tRNA1,551 bp
D-loop856 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 47.90% | −0.413 | +0.012 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 47.51% | −0.557 | +0.064 | |||||
| COX1Cytochrome c oxidase subunit I | 1,554 bp | 46.46% | −0.230 | −0.075 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.72% | −0.340 | +0.084 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 46.43% | −0.513 | +0.067 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 47.08% | −0.484 | −0.039 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.30% | −0.339 | −0.045 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 50.72% | −0.390 | −0.221 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 52.19% | −0.432 | −0.113 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.78% | −0.421 | +0.018 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 45.73% | −0.467 | +0.072 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.70% | −0.518 | +0.495 | |||||
| CYTBCytochrome b | 1,141 bp | 45.31% | −0.393 | −0.026 | |||||
| 12S rRNA12S ribosomal RNA | 954 bp | 47.48% | −0.121 | +0.230 | |||||
| 16S rRNA16S ribosomal RNA | 1,683 bp | 46.23% | −0.157 | +0.271 | |||||
| D-loopControl region (D-loop) | 856 bp | 38.79% | −0.139 | −0.015 |
Codon usage
Counts per codon, darker is more frequent3,808 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU110
UUC126
Leu L17.7%
UUA90
UUG19
CUU109
CUC219
CUA207
CUG30
Ile I7.1%
AUU141
AUC130
Met M4.1%
AUA115
AUG42
Val V5.2%
GUU56
GUC53
GUA69
GUG21
Ser S6.1%
UCU43
UCC73
UCA60
UCG4
AGU10
AGC44
Pro P6.0%
CCU48
CCC126
CCA48
CCG8
Thr T8.2%
ACU46
ACC130
ACA127
ACG11
Ala A9.3%
GCU60
GCC182
GCA100
GCG11
Tyr Y2.8%
UAU49
UAC59
His H2.8%
CAU25
CAC80
Gln Q2.6%
CAA91
CAG8
Asn N3.2%
AAU31
AAC92
Lys K1.9%
AAA71
AAG2
Asp D1.9%
GAU18
GAC53
Glu E2.6%
GAA79
GAG20
Cys C0.6%
UGU7
UGC16
Trp W3.1%
UGA102
UGG17
Arg R2.0%
CGU3
CGC20
CGA46
CGG6
Gly G6.3%
GGU19
GGC101
GGA76
GGG42
Stop 0.2%
UAA5
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_031669.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,022 | 954 bp | + | 47.5% |
| tRNA-Val | Transfer RNA | 1,023 | 1,094 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,097 | 2,779 | 1,683 bp | + | 46.2% |
| tRNA-Leu (UUR) | Transfer RNA | 2,780 | 2,855 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,856 | 3,830 | 975 bp | + | 47.9% |
| tRNA-Ile | Transfer RNA | 3,834 | 3,903 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,903 | 3,973 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,973 | 4,041 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,042 | 5,087 | 1,046 bp | + | 47.5% |
| tRNA-Trp | Transfer RNA | 5,088 | 5,159 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,163 | 5,231 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,233 | 5,305 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,343 | 5,408 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,409 | 5,479 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,481 | 7,034 | 1,554 bp | + | 46.5% |
| tRNA-Ser (UCN) | Transfer RNA | 7,035 | 7,105 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,109 | 7,175 | 67 bp | + | – |
| COX2 | Protein-coding gene | 7,187 | 7,877 | 691 bp | + | 44.7% |
| tRNA-Lys | Transfer RNA | 7,878 | 7,953 | 76 bp | + | – |
| ATP8 | Protein-coding gene | 7,955 | 8,122 | 168 bp | + | 46.4% |
| ATP6 | Protein-coding gene | 8,113 | 8,796 | 684 bp | + | 47.1% |
| COX3 | Protein-coding gene | 8,796 | 9,580 | 785 bp | + | 49.3% |
| tRNA-Gly | Transfer RNA | 9,581 | 9,652 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,653 | 10,001 | 349 bp | + | 50.7% |
| tRNA-Arg | Transfer RNA | 10,002 | 10,070 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,071 | 10,367 | 297 bp | + | 52.2% |
| ND4 | Protein-coding gene | 10,361 | 11,741 | 1,381 bp | + | 46.8% |
| tRNA-His | Transfer RNA | 11,742 | 11,810 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,811 | 11,879 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,884 | 11,956 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,957 | 13,795 | 1,839 bp | + | 45.7% |
| ND6 | Protein-coding gene | 13,792 | 14,313 | 522 bp | − | 47.7% |
| tRNA-Glu | Transfer RNA | 14,314 | 14,382 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,388 | 15,528 | 1,141 bp | + | 45.3% |
| tRNA-Thr | Transfer RNA | 15,529 | 15,600 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,600 | 15,669 | 70 bp | − | – |
| D-loop | Control region | 15,670 | 16,525 | 856 bp | – | 38.8% |