Paralaubuca typus
GC content
42.40%
Whole genome
Non-coding
995 bp
D-loop 931 bp
Where Paralaubuca typus sits among 2,335 species
Whole-genome GC content against maximum lifespan. Paralaubuca typus has the 1,776th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,613 bp
- GC skew (G − C) / (G + C)
- −0.230
- AT skew (A − T) / (A + T)
- +0.091
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,613 bp
Protein-coding11,404 bp
12S rRNA959 bp
16S rRNA1,694 bp
All tRNA1,561 bp
D-loop931 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 44.92% | −0.260 | +0.065 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 46.51% | −0.329 | +0.148 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 41.78% | −0.170 | −0.037 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 41.82% | −0.225 | +0.055 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 36.36% | −0.500 | +0.200 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 41.00% | −0.329 | +0.007 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 45.35% | −0.270 | −0.002 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 44.41% | −0.316 | −0.031 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 44.11% | −0.313 | −0.012 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,382 bp | 40.67% | −0.288 | +0.063 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,836 bp | 40.14% | −0.343 | +0.076 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 43.30% | −0.372 | +0.453 | |||||
| CYTBCytochrome b | 1,141 bp | 42.51% | −0.299 | +0.015 | |||||
| 12S rRNA12S ribosomal RNA | 959 bp | 48.91% | −0.083 | +0.224 | |||||
| 16S rRNA16S ribosomal RNA | 1,694 bp | 41.97% | −0.049 | +0.261 | |||||
| D-loopControl region (D-loop) | 931 bp | 33.41% | −0.228 | +0.029 |
Codon usage
Counts per codon, darker is more frequent3,804 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.8%
UUU94
UUC128
Leu L16.3%
UUA135
UUG23
CUU102
CUC71
CUA246
CUG42
Ile I7.4%
AUU192
AUC91
Met M4.7%
AUA126
AUG53
Val V6.1%
GUU62
GUC37
GUA105
GUG29
Ser S6.3%
UCU37
UCC56
UCA84
UCG7
AGU10
AGC45
Pro P5.7%
CCU28
CCC55
CCA118
CCG14
Thr T8.1%
ACU46
ACC96
ACA154
ACG12
Ala A8.9%
GCU54
GCC143
GCA121
GCG20
Tyr Y3.0%
UAU52
UAC62
His H2.7%
CAU36
CAC66
Gln Q2.6%
CAA85
CAG13
Asn N3.3%
AAU59
AAC67
Lys K2.1%
AAA69
AAG10
Asp D2.0%
GAU22
GAC54
Glu E2.7%
GAA84
GAG18
Cys C0.7%
UGU11
UGC16
Trp W3.2%
UGA106
UGG15
Arg R2.0%
CGU8
CGC13
CGA44
CGG11
Gly G6.3%
GGU30
GGC46
GGA134
GGG31
Stop 0.2%
UAA4
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_015194.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (42.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,028 | 959 bp | + | 48.9% |
| tRNA-Val | Transfer RNA | 1,029 | 1,100 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,101 | 2,794 | 1,694 bp | + | 42.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,795 | 2,870 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,872 | 3,846 | 975 bp | + | 44.9% |
| tRNA-Ile | Transfer RNA | 3,851 | 3,922 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,921 | 3,991 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,993 | 4,061 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,062 | 5,106 | 1,045 bp | + | 46.5% |
| tRNA-Trp | Transfer RNA | 5,107 | 5,177 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,179 | 5,247 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,249 | 5,321 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,355 | 5,422 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,424 | 5,494 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,496 | 7,046 | 1,551 bp | + | 41.8% |
| tRNA-Ser (UCN) | Transfer RNA | 7,047 | 7,117 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,122 | 7,193 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,207 | 7,897 | 691 bp | + | 41.8% |
| tRNA-Lys | Transfer RNA | 7,898 | 7,973 | 76 bp | + | – |
| ATP8 | Protein-coding gene | 7,975 | 8,139 | 165 bp | + | 36.4% |
| ATP6 | Protein-coding gene | 8,133 | 8,815 | 683 bp | + | 41.0% |
| COX3 | Protein-coding gene | 8,816 | 9,600 | 785 bp | + | 45.4% |
| tRNA-Gly | Transfer RNA | 9,601 | 9,672 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,673 | 10,021 | 349 bp | + | 44.4% |
| tRNA-Arg | Transfer RNA | 10,022 | 10,091 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,092 | 10,388 | 297 bp | + | 44.1% |
| ND4 | Protein-coding gene | 10,382 | 11,763 | 1,382 bp | + | 40.7% |
| tRNA-His | Transfer RNA | 11,764 | 11,832 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,833 | 11,901 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,903 | 11,975 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,976 | 13,811 | 1,836 bp | + | 40.1% |
| ND6 | Protein-coding gene | 13,808 | 14,329 | 522 bp | − | 43.3% |
| tRNA-Glu | Transfer RNA | 14,330 | 14,398 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,401 | 15,541 | 1,141 bp | + | 42.5% |
| tRNA-Thr | Transfer RNA | 15,542 | 15,613 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,613 | 15,682 | 70 bp | − | – |
| D-loop | Control region | 15,683 | 16,613 | 931 bp | – | 33.4% |