Parambassis ranga
Indian glassy fish
GC content
45.00%
Whole genome
Non-coding
1,737 bp
D-loop 1,677 bp
Where Indian glassy fish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Indian glassy fish has the 2,217th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome17,345 bp
- GC skew (G − C) / (G + C)
- −0.293
- AT skew (A − T) / (A + T)
- +0.017
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,345 bp
Protein-coding11,412 bp
12S rRNA947 bp
16S rRNA1,698 bp
All tRNA1,551 bp
D-loop1,677 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 44.10% | −0.358 | −0.086 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 45.17% | −0.441 | +0.037 | |||||
| COX1Cytochrome c oxidase subunit I | 1,554 bp | 47.94% | −0.192 | −0.145 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 45.01% | −0.260 | +0.005 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 41.07% | −0.420 | +0.071 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 45.03% | −0.448 | −0.059 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.43% | −0.325 | −0.098 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 43.27% | −0.325 | −0.192 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 49.16% | −0.397 | −0.179 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.34% | −0.384 | −0.023 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 44.64% | −0.420 | 0.000 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.13% | −0.447 | +0.449 | |||||
| CYTBCytochrome b | 1,144 bp | 45.28% | −0.344 | −0.115 | |||||
| 12S rRNA12S ribosomal RNA | 947 bp | 47.73% | −0.124 | +0.184 | |||||
| 16S rRNA16S ribosomal RNA | 1,698 bp | 45.58% | −0.158 | +0.229 | |||||
| D-loopControl region (D-loop) | 1,677 bp | 37.00% | −0.267 | +0.008 |
Codon usage
Counts per codon, darker is more frequent3,809 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU99
UUC135
Leu L17.6%
UUA104
UUG26
CUU166
CUC156
CUA167
CUG50
Ile I6.8%
AUU152
AUC108
Met M4.2%
AUA101
AUG60
Val V5.6%
GUU64
GUC64
GUA63
GUG23
Ser S6.5%
UCU57
UCC78
UCA50
UCG8
AGU7
AGC46
Pro P5.7%
CCU70
CCC97
CCA36
CCG13
Thr T8.2%
ACU72
ACC117
ACA112
ACG13
Ala A8.9%
GCU74
GCC145
GCA106
GCG14
Tyr Y3.0%
UAU49
UAC64
His H2.8%
CAU22
CAC84
Gln Q2.5%
CAA80
CAG14
Asn N3.2%
AAU40
AAC80
Lys K2.0%
AAA64
AAG12
Asp D1.9%
GAU33
GAC40
Glu E2.7%
GAA83
GAG21
Cys C0.7%
UGU7
UGC20
Trp W3.1%
UGA103
UGG15
Arg R2.0%
CGU8
CGC17
CGA43
CGG8
Gly G6.4%
GGU45
GGC101
GGA62
GGG34
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_053943.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 70 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 71 | 1,017 | 947 bp | + | 47.7% |
| tRNA-Val | Transfer RNA | 1,018 | 1,090 | 73 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,091 | 2,788 | 1,698 bp | + | 45.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,789 | 2,862 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,863 | 3,837 | 975 bp | + | 44.1% |
| tRNA-Ile | Transfer RNA | 3,842 | 3,911 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,911 | 3,981 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,981 | 4,049 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,050 | 5,094 | 1,045 bp | + | 45.2% |
| tRNA-Trp | Transfer RNA | 5,095 | 5,164 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,166 | 5,234 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,236 | 5,308 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,342 | 5,407 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,407 | 5,477 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,479 | 7,032 | 1,554 bp | + | 47.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,036 | 7,106 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,110 | 7,181 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,185 | 7,875 | 691 bp | + | 45.0% |
| tRNA-Lys | Transfer RNA | 7,876 | 7,949 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,951 | 8,118 | 168 bp | + | 41.1% |
| ATP6 | Protein-coding gene | 8,109 | 8,792 | 684 bp | + | 45.0% |
| COX3 | Protein-coding gene | 8,792 | 9,576 | 785 bp | + | 49.4% |
| tRNA-Gly | Transfer RNA | 9,577 | 9,647 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,648 | 9,996 | 349 bp | + | 43.3% |
| tRNA-Arg | Transfer RNA | 9,997 | 10,065 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,066 | 10,362 | 297 bp | + | 49.2% |
| ND4 | Protein-coding gene | 10,356 | 11,736 | 1,381 bp | + | 46.3% |
| tRNA-His | Transfer RNA | 11,737 | 11,805 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,806 | 11,873 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,878 | 11,950 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,951 | 13,789 | 1,839 bp | + | 44.6% |
| ND6 | Protein-coding gene | 13,786 | 14,307 | 522 bp | − | 47.1% |
| tRNA-Glu | Transfer RNA | 14,308 | 14,376 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,377 | 15,520 | 1,144 bp | + | 45.3% |
| tRNA-Thr | Transfer RNA | 15,521 | 15,593 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,600 | 15,668 | 69 bp | − | – |
| D-loop | Control region | 15,669 | 17,345 | 1,677 bp | – | 37.0% |