Parupeneus chrysopleuron
Yellowband goatfish
GC content
48.90%
Whole genome
Non-coding
1,728 bp
Including the D-loop
Where Yellowband goatfish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Yellowband goatfish has the 2,144th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome17,397 bp
- GC skew (G − C) / (G + C)
- −0.232
- AT skew (A − T) / (A + T)
- +0.016
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an estimate, not an observed animal
- Data quality
- low
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,397 bp
Protein-coding11,404 bp
12S rRNA952 bp
16S rRNA1,687 bp
All tRNA1,626 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 51.28% | −0.308 | −0.112 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 49.62% | −0.391 | −0.017 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 48.10% | −0.145 | −0.091 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 47.61% | −0.240 | −0.028 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 52.38% | −0.364 | +0.125 | |||||
| ATP6ATP synthase F0 subunit 6 | 690 bp | 48.70% | −0.333 | −0.136 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 50.83% | −0.273 | −0.093 | |||||
| ND3NADH dehydrogenase subunit 3 | 350 bp | 50.86% | −0.348 | −0.198 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 49.83% | −0.351 | −0.101 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 51.05% | −0.308 | −0.033 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 48.18% | −0.318 | −0.030 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 50.58% | −0.364 | +0.419 | |||||
| CYTBCytochrome b | 1,141 bp | 48.12% | −0.275 | −0.115 | |||||
| 12S rRNA12S ribosomal RNA | 952 bp | 51.89% | −0.093 | +0.210 | |||||
| 16S rRNA16S ribosomal RNA | 1,687 bp | 47.30% | −0.075 | +0.224 |
Codon usage
Counts per codon, darker is more frequent3,809 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU79
UUC152
Leu L17.1%
UUA53
UUG23
CUU140
CUC193
CUA155
CUG88
Ile I6.7%
AUU135
AUC122
Met M3.9%
AUA62
AUG86
Val V6.6%
GUU80
GUC60
GUA58
GUG53
Ser S6.3%
UCU53
UCC65
UCA59
UCG17
AGU8
AGC38
Pro P5.6%
CCU38
CCC101
CCA58
CCG18
Thr T7.8%
ACU54
ACC115
ACA105
ACG23
Ala A9.5%
GCU68
GCC156
GCA103
GCG34
Tyr Y2.7%
UAU39
UAC64
His H3.0%
CAU27
CAC86
Gln Q2.4%
CAA64
CAG29
Asn N3.0%
AAU38
AAC77
Lys K1.9%
AAA57
AAG17
Asp D2.0%
GAU20
GAC58
Glu E2.7%
GAA64
GAG39
Cys C0.8%
UGU9
UGC20
Trp W3.1%
UGA78
UGG40
Arg R2.0%
CGU13
CGC19
CGA34
CGG10
Gly G6.5%
GGU38
GGC90
GGA66
GGG54
Stop 0.2%
UAA5
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_029247.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA23
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (48.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,021 | 952 bp | + | 51.9% |
| tRNA-Val | Transfer RNA | 1,022 | 1,093 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,094 | 2,780 | 1,687 bp | + | 47.3% |
| tRNA-Leu (UUR) | Transfer RNA | 2,781 | 2,854 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,855 | 3,829 | 975 bp | + | 51.3% |
| tRNA-Met | Transfer RNA | 3,949 | 4,019 | 71 bp | + | – |
| ND2 | Protein-coding gene | 4,021 | 5,066 | 1,046 bp | + | 49.6% |
| tRNA-Trp | Transfer RNA | 5,067 | 5,137 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,138 | 5,206 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,207 | 5,279 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,313 | 5,379 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,380 | 5,449 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,451 | 7,001 | 1,551 bp | + | 48.1% |
| tRNA-Ser (UCN) | Transfer RNA | 7,022 | 7,092 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,095 | 7,167 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,174 | 7,864 | 691 bp | + | 47.6% |
| tRNA-Lys | Transfer RNA | 7,865 | 7,938 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,940 | 8,107 | 168 bp | + | 52.4% |
| ATP6 | Protein-coding gene | 8,092 | 8,781 | 690 bp | + | 48.7% |
| COX3 | Protein-coding gene | 8,781 | 9,565 | 785 bp | + | 50.8% |
| tRNA-Gly | Transfer RNA | 9,566 | 9,636 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,637 | 9,986 | 350 bp | + | 50.9% |
| tRNA-Arg | Transfer RNA | 9,987 | 10,055 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,056 | 10,352 | 297 bp | + | 49.8% |
| ND4 | Protein-coding gene | 10,346 | 11,726 | 1,381 bp | + | 51.1% |
| tRNA-His | Transfer RNA | 11,727 | 11,796 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,797 | 11,864 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,868 | 11,940 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,941 | 13,779 | 1,839 bp | + | 48.2% |
| ND6 | Protein-coding gene | 13,772 | 14,293 | 522 bp | − | 50.6% |
| tRNA-Glu | Transfer RNA | 14,294 | 14,362 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,368 | 15,508 | 1,141 bp | + | 48.1% |
| tRNA-Thr | Transfer RNA | 15,509 | 15,579 | 71 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,579 | 15,648 | 70 bp | − | – |
| tRNA-Gln | Transfer RNA | 16,463 | 16,533 | 71 bp | − | – |
| tRNA-Ile | Transfer RNA | 16,867 | 16,936 | 70 bp | + | – |
| tRNA-Met | Transfer RNA | 17,268 | 17,338 | 71 bp | + | – |