Penaeus indicus
Indian white prawn
GC content
31.95%
Whole genome
Non-coding
1,235 bp
D-loop 1,001 bp
Where Indian white prawn sits among 2,335 species
Whole-genome GC content against maximum lifespan. Indian white prawn has the 2,261st longest lifespan of them.
- This species
- All other species
Base composition
Whole genome16,071 bp
- GC skew (G − C) / (G + C)
- −0.183
- AT skew (A − T) / (A + T)
- −0.014
About this record
- Lifespan source
- SeaLifeBase v26.06
- Based on
- an estimate, not an observed animal
- Data quality
- low
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,071 bp
Protein-coding11,140 bp
12S rRNA849 bp
16S rRNA1,354 bp
All tRNA1,493 bp
D-loop1,001 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 939 bp | 31.84% | −0.151 | +0.225 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,000 bp | 32.50% | −0.317 | −0.194 | |||||
| COX1Cytochrome c oxidase subunit I | 1,534 bp | 36.57% | −0.041 | −0.147 | |||||
| COX2Cytochrome c oxidase subunit II | 688 bp | 36.63% | −0.071 | −0.087 | |||||
| ATP8ATP synthase F0 subunit 8 | 159 bp | 27.04% | −0.209 | +0.017 | |||||
| ATP6ATP synthase F0 subunit 6 | 675 bp | 35.56% | −0.175 | −0.145 | |||||
| COX3Cytochrome c oxidase subunit III | 790 bp | 38.48% | −0.132 | −0.115 | |||||
| ND3NADH dehydrogenase subunit 3 | 352 bp | 30.68% | −0.111 | −0.197 | |||||
| ND4LNADH dehydrogenase subunit 4L | 300 bp | 29.00% | −0.379 | +0.286 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,341 bp | 29.75% | −0.283 | +0.212 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,723 bp | 32.73% | −0.213 | +0.184 | |||||
| ND6NADH dehydrogenase subunit 6 | 516 bp | 28.30% | −0.384 | −0.249 | |||||
| CYTBCytochrome b | 1,137 bp | 35.18% | −0.170 | −0.148 | |||||
| 12S rRNA12S ribosomal RNA | 849 bp | 30.98% | −0.209 | −0.014 | |||||
| 16S rRNA16S ribosomal RNA | 1,354 bp | 27.40% | −0.278 | −0.054 | |||||
| D-loopControl region (D-loop) | 1,001 bp | 20.48% | −0.122 | −0.068 |
Codon usage
Counts per codon, darker is more frequent3,716 codons in all protein-coding genes. Grouped with the Invertebrate mitochondrial code (NCBI table 5).
Phe F7.8%
UUU211
UUC77
Leu L15.8%
UUA281
UUG60
CUU118
CUC24
CUA77
CUG26
Ile I7.5%
AUU234
AUC46
Met M5.2%
AUA155
AUG40
Val V7.7%
GUU109
GUC22
GUA129
GUG25
Ser S9.6%
UCU115
UCC23
UCA81
UCG11
AGU49
AGC13
AGA65
AGG0
Pro P3.9%
CCU78
CCC25
CCA27
CCG15
Thr T5.4%
ACU92
ACC21
ACA76
ACG10
Ala A6.8%
GCU143
GCC47
GCA54
GCG8
Tyr Y3.9%
UAU106
UAC39
His H2.2%
CAU46
CAC37
Gln Q2.0%
CAA58
CAG18
Asn N3.7%
AAU99
AAC39
Lys K2.2%
AAA68
AAG12
Asp D2.0%
GAU50
GAC24
Glu E2.1%
GAA61
GAG18
Cys C1.1%
UGU33
UGC9
Trp W2.7%
UGA82
UGG19
Arg R1.6%
CGU12
CGC1
CGA40
CGG7
Gly G6.6%
GGU72
GGC12
GGA104
GGG56
Stop 0.2%
UAA6
UAG1
Genome map
38 annotated features in NC_031366.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (32.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Ile | Transfer RNA | 1 | 67 | 67 bp | + | – |
| tRNA-Gln | Transfer RNA | 85 | 154 | 70 bp | − | – |
| tRNA-Met | Transfer RNA | 186 | 253 | 68 bp | + | – |
| ND2 | Protein-coding gene | 254 | 1,253 | 1,000 bp | + | 32.5% |
| tRNA-Trp | Transfer RNA | 1,254 | 1,322 | 69 bp | + | – |
| tRNA-Cys | Transfer RNA | 1,410 | 1,479 | 70 bp | − | – |
| tRNA-Tyr | Transfer RNA | 1,481 | 1,545 | 65 bp | − | – |
| COX1 | Protein-coding gene | 1,549 | 3,082 | 1,534 bp | + | 36.6% |
| tRNA-Leu | Transfer RNA | 3,083 | 3,148 | 66 bp | + | – |
| COX2 | Protein-coding gene | 3,154 | 3,841 | 688 bp | + | 36.6% |
| tRNA-Lys | Transfer RNA | 3,842 | 3,910 | 69 bp | + | – |
| tRNA-Asp | Transfer RNA | 3,913 | 3,980 | 68 bp | + | – |
| ATP8 | Protein-coding gene | 3,981 | 4,139 | 159 bp | + | 27.0% |
| ATP6 | Protein-coding gene | 4,133 | 4,807 | 675 bp | + | 35.6% |
| COX3 | Protein-coding gene | 4,818 | 5,607 | 790 bp | + | 38.5% |
| tRNA-Gly | Transfer RNA | 5,608 | 5,673 | 66 bp | + | – |
| ND3 | Protein-coding gene | 5,674 | 6,025 | 352 bp | + | 30.7% |
| tRNA-Ala | Transfer RNA | 6,026 | 6,090 | 65 bp | + | – |
| tRNA-Arg | Transfer RNA | 6,093 | 6,157 | 65 bp | + | – |
| tRNA-Asn | Transfer RNA | 6,159 | 6,227 | 69 bp | + | – |
| tRNA-Ser | Transfer RNA | 6,231 | 6,297 | 67 bp | + | – |
| tRNA-Glu | Transfer RNA | 6,298 | 6,367 | 70 bp | + | – |
| tRNA-Phe | Transfer RNA | 6,387 | 6,454 | 68 bp | − | – |
| ND5 | Protein-coding gene | 6,455 | 8,177 | 1,723 bp | − | 32.7% |
| tRNA-His | Transfer RNA | 8,187 | 8,253 | 67 bp | − | – |
| ND4 | Protein-coding gene | 8,254 | 9,594 | 1,341 bp | − | 29.8% |
| ND4L | Protein-coding gene | 9,588 | 9,887 | 300 bp | − | 29.0% |
| tRNA-Thr | Transfer RNA | 9,890 | 9,957 | 68 bp | + | – |
| tRNA-Pro | Transfer RNA | 9,958 | 10,024 | 67 bp | − | – |
| ND6 | Protein-coding gene | 10,026 | 10,541 | 516 bp | + | 28.3% |
| CYTB | Protein-coding gene | 10,545 | 11,681 | 1,137 bp | + | 35.2% |
| tRNA-Ser | Transfer RNA | 11,683 | 11,752 | 70 bp | + | – |
| ND1 | Protein-coding gene | 11,771 | 12,709 | 939 bp | − | 31.8% |
| tRNA-Leu | Transfer RNA | 12,715 | 12,781 | 67 bp | − | – |
| 16S rRNA | Ribosomal RNA | 12,783 | 14,136 | 1,354 bp | − | 27.4% |
| tRNA-Val | Transfer RNA | 14,149 | 14,220 | 72 bp | − | – |
| 12S rRNA | Ribosomal RNA | 14,222 | 15,070 | 849 bp | − | 31.0% |
| D-loop | Control region | 15,071 | 16,071 | 1,001 bp | – | 20.5% |