MitoAge

Peromyscus crinitus

Canyon mouse

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Maximum lifespan
7.7 yr
AnAge record
mtDNA size
16,672 bp
RefSeq NC_035614.1
GC content
37.82%
Whole genome
Non-coding
1,373 bp
Including the D-loop

Where Canyon mouse sits among 2,335 species

Whole-genome GC content against maximum lifespan. Canyon mouse has the 1,792nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Canyon mouse
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,672 bp
GC skew (G − C) / (G + C)
−0.312
AT skew (A − T) / (A + T)
+0.101

Life history

Maximum lifespan
7.7 years
Adult weight
16.5 g
Birth weight
2.2 g
Basal metabolic rate
0.162 W
Body temperature
35.7 °C
Female sexual maturity
70 days
Male sexual maturity
70 days
Gestation or incubation
24 days
Litter or clutch size
3
Litters per year
2.1

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02913)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,672 bp
Protein-coding11,348 bp
12S rRNA952 bp
16S rRNA1,505 bp
All tRNA1,500 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp33.1%27.3%11.8%27.8%39.60%−0.404+0.097
ND2NADH dehydrogenase subunit 21,038 bp38.6%26.5%7.7%27.2%34.88%−0.558+0.186
COX1Cytochrome c oxidase subunit I1,545 bp29.6%29.8%16.7%23.9%40.58%−0.177−0.004
COX2Cytochrome c oxidase subunit II684 bp34.5%27.8%13.6%24.1%37.72%−0.279+0.108
ATP8ATP synthase F0 subunit 8204 bp39.7%27.5%6.9%26.0%32.84%−0.582+0.182
ATP6ATP synthase F0 subunit 6681 bp31.4%30.8%11.2%26.6%37.74%−0.409+0.009
COX3Cytochrome c oxidase subunit III784 bp29.7%28.4%15.2%26.7%41.84%−0.274+0.022
ND3NADH dehydrogenase subunit 3348 bp30.7%33.6%12.1%23.6%35.63%−0.323−0.045
ND4LNADH dehydrogenase subunit 4L297 bp31.6%33.0%12.5%22.9%35.35%−0.295−0.021
ND4NADH dehydrogenase subunit 41,378 bp35.0%29.1%9.9%26.1%35.92%−0.451+0.092
ND5NADH dehydrogenase subunit 51,815 bp34.5%26.9%10.0%28.6%38.57%−0.483+0.125
ND6NADH dehydrogenase subunit 6528 bp41.3%20.5%8.3%29.9%38.26%−0.564+0.337
CYTBCytochrome b1,144 bp30.8%28.3%12.8%28.1%40.91%−0.376+0.041
12S rRNA12S ribosomal RNA952 bp37.2%24.3%18.0%20.6%38.55%−0.068+0.210
16S rRNA16S ribosomal RNA1,505 bp37.5%25.0%17.3%20.1%37.48%−0.074+0.199

Codon usage

Counts per codon, darker is more frequent

3,800 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%
UUU97
UUC134
Leu L15.5%
UUA138
UUG9
CUU72
CUC60
CUA285
CUG25
Ile I9.3%
AUU199
AUC154
Met M6.5%
AUA216
AUG30
Val V4.6%
GUU41
GUC17
GUA98
GUG20
Ser S8.1%
UCU53
UCC57
UCA133
UCG7
AGU14
AGC42
Pro P5.3%
CCU27
CCC44
CCA127
CCG3
Thr T8.1%
ACU57
ACC80
ACA165
ACG5
Ala A6.2%
GCU50
GCC90
GCA90
GCG7
Tyr Y3.3%
UAU61
UAC64
His H2.6%
CAU26
CAC72
Gln Q2.1%
CAA69
CAG9
Asn N4.5%
AAU53
AAC118
Lys K2.7%
AAA87
AAG14
Asp D1.8%
GAU28
GAC40
Glu E2.5%
GAA76
GAG18
Cys C0.8%
UGU9
UGC22
Trp W2.7%
UGA98
UGG5
Arg R1.7%
CGU7
CGC14
CGA43
CGG1
Gly G5.5%
GGU33
GGC32
GGA97
GGG48
Stop 0.3%
UAA8
UAG2
AGA0
AGG0

Genome map

37 annotated features in NC_035614.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (37.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA39646368 bp+–
12S rRNARibosomal RNA4661,417952 bp+38.6%
tRNA-ValTransfer RNA1,4181,48972 bp+–
16S rRNARibosomal RNA1,5343,0381,505 bp+37.5%
tRNA-Leu (UUR)Transfer RNA3,0543,12976 bp+–
ND1Protein-coding gene3,1304,086957 bp+39.6%
tRNA-IleTransfer RNA4,0844,15471 bp+–
tRNA-GlnTransfer RNA4,1514,22070 bp−–
tRNA-MetTransfer RNA4,2264,29469 bp+–
ND2Protein-coding gene4,2955,3321,038 bp+34.9%
tRNA-TrpTransfer RNA5,3335,39664 bp+–
tRNA-AlaTransfer RNA5,3995,46769 bp−–
tRNA-AsnTransfer RNA5,4705,53970 bp−–
tRNA-CysTransfer RNA5,5715,63767 bp−–
tRNA-TyrTransfer RNA5,6385,70568 bp−–
COX1Protein-coding gene5,7077,2511,545 bp+40.6%
tRNA-Ser (UCN)Transfer RNA7,2497,31769 bp−–
tRNA-AspTransfer RNA7,3217,38868 bp+–
COX2Protein-coding gene7,3908,073684 bp+37.7%
tRNA-LysTransfer RNA8,0778,14165 bp+–
ATP8Protein-coding gene8,1438,346204 bp+32.8%
ATP6Protein-coding gene8,3048,984681 bp+37.7%
COX3Protein-coding gene8,9849,767784 bp+41.8%
tRNA-GlyTransfer RNA9,7689,83669 bp+–
ND3Protein-coding gene9,83710,184348 bp+35.6%
tRNA-ArgTransfer RNA10,18710,25367 bp+–
ND4LProtein-coding gene10,25610,552297 bp+35.4%
ND4Protein-coding gene10,54611,9231,378 bp+35.9%
tRNA-HisTransfer RNA11,92411,99269 bp+–
tRNA-Ser (AGY)Transfer RNA11,99312,05058 bp+–
tRNA-Leu (CUN)Transfer RNA12,05112,12070 bp+–
ND5Protein-coding gene12,12113,9351,815 bp+38.6%
ND6Protein-coding gene13,93214,459528 bp−38.3%
tRNA-GluTransfer RNA14,46014,52869 bp−–
CYTBProtein-coding gene14,53415,6771,144 bp+40.9%
tRNA-ThrTransfer RNA15,67815,74669 bp+–
tRNA-ProTransfer RNA15,74715,81367 bp−–

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