MitoAge

Peromyscus leucopus

White-footed mouse

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Maximum lifespan
7.9 yr
AnAge record
mtDNA size
16,326 bp
RefSeq NC_037180.1
GC content
37.54%
Whole genome
Non-coding
952 bp
D-loop 895 bp

Where White-footed mouse sits among 2,335 species

Whole-genome GC content against maximum lifespan. White-footed mouse has the 1,784th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %White-footed mouse
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,326 bp
GC skew (G − C) / (G + C)
−0.315
AT skew (A − T) / (A + T)
+0.106

Life history

Maximum lifespan
7.9 years
Adult weight
23 g
Birth weight
1.9 g
Basal metabolic rate
0.213 W
Body temperature
36.7 °C
Female sexual maturity
73 days
Gestation or incubation
26 days
Litter or clutch size
4.5
Litters per year
3.7
Postnatal growth rate
0.0456 per day

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02916)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,326 bp
Protein-coding11,346 bp
12S rRNA954 bp
16S rRNA1,575 bp
All tRNA1,502 bp
D-loop895 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp32.8%27.9%12.3%27.1%39.37%−0.378+0.081
ND2NADH dehydrogenase subunit 21,038 bp38.8%26.5%7.7%27.0%34.68%−0.556+0.189
COX1Cytochrome c oxidase subunit I1,545 bp29.8%31.1%16.3%22.7%39.03%−0.164−0.021
COX2Cytochrome c oxidase subunit II684 bp35.1%26.2%13.3%25.4%38.74%−0.313+0.146
ATP8ATP synthase F0 subunit 8204 bp37.3%31.9%6.9%24.0%30.88%−0.556+0.078
ATP6ATP synthase F0 subunit 6681 bp32.7%29.8%10.1%27.3%37.45%−0.459+0.047
COX3Cytochrome c oxidase subunit III784 bp30.2%28.7%14.5%26.5%41.07%−0.292+0.026
ND3NADH dehydrogenase subunit 3348 bp33.6%28.2%12.4%25.9%38.22%−0.353+0.088
ND4LNADH dehydrogenase subunit 4L297 bp29.6%30.6%12.1%27.6%39.73%−0.390−0.017
ND4NADH dehydrogenase subunit 41,378 bp34.5%28.7%10.1%26.8%36.87%−0.453+0.092
ND5NADH dehydrogenase subunit 51,815 bp34.9%28.4%9.8%26.9%36.69%−0.468+0.102
ND6NADH dehydrogenase subunit 6528 bp40.9%19.7%7.4%32.0%39.39%−0.625+0.350
CYTBCytochrome b1,144 bp32.2%27.5%12.9%27.4%40.30%−0.358+0.078
12S rRNA12S ribosomal RNA954 bp36.9%25.2%17.6%20.3%37.95%−0.072+0.189
16S rRNA16S ribosomal RNA1,575 bp38.6%25.0%16.6%19.8%36.44%−0.087+0.215
D-loopControl region (D-loop)895 bp32.6%32.0%12.5%22.9%35.42%−0.293+0.010

Codon usage

Counts per codon, darker is more frequent

3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU111
UUC123
Leu L15.6%
UUA132
UUG15
CUU59
CUC56
CUA307
CUG24
Ile I9.2%
AUU198
AUC153
Met M6.0%
AUA192
AUG36
Val V4.9%
GUU38
GUC20
GUA105
GUG23
Ser S7.8%
UCU49
UCC57
UCA134
UCG4
AGU16
AGC38
Pro P5.4%
CCU37
CCC33
CCA131
CCG3
Thr T8.3%
ACU62
ACC81
ACA168
ACG5
Ala A6.2%
GCU53
GCC88
GCA87
GCG6
Tyr Y3.3%
UAU61
UAC64
His H2.4%
CAU20
CAC70
Gln Q2.1%
CAA73
CAG8
Asn N4.6%
AAU55
AAC121
Lys K2.7%
AAA95
AAG7
Asp D1.8%
GAU31
GAC38
Glu E2.5%
GAA78
GAG17
Cys C0.8%
UGU11
UGC20
Trp W2.7%
UGA94
UGG8
Arg R1.7%
CGU6
CGC13
CGA45
CGG1
Gly G5.5%
GGU30
GGC30
GGA116
GGG34
Stop 0.2%
UAA7
UAG2
AGA0
AGG0

Genome map

38 annotated features in NC_037180.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (37.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA711,024954 bp+38.0%
tRNA-ValTransfer RNA1,0251,09672 bp+–
16S rRNARibosomal RNA1,0972,6711,575 bp+36.4%
tRNA-Leu (UUR)Transfer RNA2,6722,74675 bp+–
ND1Protein-coding gene2,7473,701955 bp+39.4%
tRNA-IleTransfer RNA3,7023,77069 bp+–
tRNA-GlnTransfer RNA3,7683,83871 bp−–
tRNA-MetTransfer RNA3,8433,91169 bp+–
ND2Protein-coding gene3,9124,9491,038 bp+34.7%
tRNA-TrpTransfer RNA4,9505,01566 bp+–
tRNA-AlaTransfer RNA5,0175,08569 bp−–
tRNA-AsnTransfer RNA5,0885,15770 bp−–
tRNA-CysTransfer RNA5,1895,25668 bp−–
tRNA-TyrTransfer RNA5,2575,32468 bp−–
COX1Protein-coding gene5,3266,8701,545 bp+39.0%
tRNA-Ser (UCN)Transfer RNA6,8686,93669 bp−–
tRNA-AspTransfer RNA6,9407,00768 bp+–
COX2Protein-coding gene7,0097,692684 bp+38.7%
tRNA-LysTransfer RNA7,6967,76065 bp+–
ATP8Protein-coding gene7,7627,965204 bp+30.9%
ATP6Protein-coding gene7,9238,603681 bp+37.5%
COX3Protein-coding gene8,6039,386784 bp+41.1%
tRNA-GlyTransfer RNA9,3879,45569 bp+–
ND3Protein-coding gene9,4569,803348 bp+38.2%
tRNA-ArgTransfer RNA9,8059,87268 bp+–
ND4LProtein-coding gene9,87610,172297 bp+39.7%
ND4Protein-coding gene10,16611,5431,378 bp+36.9%
tRNA-HisTransfer RNA11,54411,61269 bp+–
tRNA-Ser (AGY)Transfer RNA11,61311,67159 bp+–
tRNA-Leu (CUN)Transfer RNA11,67111,74070 bp+–
ND5Protein-coding gene11,74113,5551,815 bp+36.7%
ND6Protein-coding gene13,55214,079528 bp−39.4%
tRNA-GluTransfer RNA14,08014,14869 bp−–
CYTBProtein-coding gene14,15315,2961,144 bp+40.3%
tRNA-ThrTransfer RNA15,29715,36468 bp+–
tRNA-ProTransfer RNA15,36515,43167 bp−–
D-loopControl region15,43216,326895 bp–35.4%

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