Petaurista alborufus

Red and white giant flying squirrel

Maximum lifespan

21.4 yr

AnAge record

mtDNA size

16,507 bp

RefSeq NC_023922.1

GC content

39.61%

Whole genome

Non-coding

1,114 bp

D-loop 976 bp

Where Red and white giant flying squirrel sits among 2,335 species

Whole-genome GC content against maximum lifespan. Red and white giant flying squirrel has the 823rd longest lifespan of them.

This species
Other mammals
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,507 bp

GC skew (G − C) / (G + C): −0.333
AT skew (A − T) / (A + T): +0.053

Life history

Maximum lifespan: 21.4 years
Adult weight: 1.7 kg

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03147)

About this record

Lifespan source: AnAge build 15
Based on: an animal in captivity
Data quality: acceptable, small sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,507 bp

Protein-coding11,331 bp

12S rRNA971 bp

16S rRNA1,574 bp

All tRNA1,517 bp

D-loop976 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Petaurista alborufus genes

ND1NADH dehydrogenase subunit 1	957 bp	31.3%	27.6%	11.6%	29.5%	41.07%	−0.435	+0.064
ND2NADH dehydrogenase subunit 2	1,042 bp	34.4%	28.9%	8.3%	28.4%	36.76%	−0.546	+0.086
COX1Cytochrome c oxidase subunit I	1,542 bp	27.8%	30.9%	17.1%	24.3%	41.38%	−0.172	−0.053
COX2Cytochrome c oxidase subunit II	684 bp	30.6%	28.7%	15.4%	25.4%	40.79%	−0.247	+0.032
ATP8ATP synthase F0 subunit 8	204 bp	36.8%	27.9%	5.4%	29.9%	35.29%	−0.694	+0.136
ATP6ATP synthase F0 subunit 6	680 bp	28.8%	30.9%	11.0%	29.3%	40.29%	−0.453	−0.034
COX3Cytochrome c oxidase subunit III	784 bp	26.5%	30.1%	15.7%	27.7%	43.37%	−0.276	−0.063
ND3NADH dehydrogenase subunit 3	347 bp	26.8%	29.4%	13.8%	30.0%	43.80%	−0.368	−0.046
ND4LNADH dehydrogenase subunit 4L	297 bp	26.6%	33.0%	12.1%	28.3%	40.40%	−0.400	−0.107
ND4NADH dehydrogenase subunit 4	1,378 bp	31.4%	31.9%	10.4%	26.3%	36.72%	−0.431	−0.007
ND5NADH dehydrogenase subunit 5	1,818 bp	32.0%	28.9%	10.2%	28.9%	39.11%	−0.477	+0.051
ND6NADH dehydrogenase subunit 6	525 bp	41.3%	21.5%	6.5%	30.7%	37.14%	−0.651	+0.315
CYTBCytochrome b	1,140 bp	27.8%	29.0%	12.9%	30.3%	43.16%	−0.402	−0.022
12S rRNA12S ribosomal RNA	971 bp	33.3%	24.3%	17.5%	24.9%	42.43%	−0.175	+0.156
16S rRNA16S ribosomal RNA	1,574 bp	36.4%	25.3%	16.6%	21.6%	38.25%	−0.130	+0.179
D-loopControl region (D-loop)	976 bp	31.4%	28.9%	13.5%	26.2%	39.75%	−0.320	+0.041

Codon usage

Counts per codon, darker is more frequent

Gene

3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.5%

UUU120

UUC125

Leu L16.0%

UUA119

UUG18

CUU108

CUC112

CUA221

CUG30

Ile I8.9%

AUU161

AUC176

Met M6.1%

AUA192

AUG40

Val V4.8%

GUU39

GUC48

GUA80

GUG15

Ser S8.0%

UCU64

UCC68

UCA117

UCG8

AGU17

AGC30

Pro P5.2%

CCU54

CCC79

CCA63

CCG3

Thr T8.0%

ACU79

ACC82

ACA135

ACG7

Ala A6.2%

GCU53

GCC83

GCA92

GCG9

Tyr Y3.5%

UAU62

UAC69

His H2.4%

CAU32

CAC61

Gln Q2.1%

CAA70

CAG10

Asn N4.2%

AAU58

AAC102

Lys K2.6%

AAA84

AAG13

Asp D1.8%

GAU40

GAC30

Glu E2.6%

GAA70

GAG29

Cys C0.7%

UGU9

UGC17

Trp W2.8%

UGA94

UGG11

Arg R1.7%

CGU10

CGC11

CGA41

CGG3

Gly G5.7%

GGU30

GGC60

GGA90

GGG36

Stop 0.2%

UAA6

UAG0

AGA1

AGG1

Genome map

38 annotated features in NC_023922.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (39.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Petaurista alborufus (NC_023922.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	66	66 bp	+	–
12S rRNA	Ribosomal RNA	67	1,037	971 bp	+	42.4%
tRNA-Val	Transfer RNA	1,038	1,106	69 bp	+	–
16S rRNA	Ribosomal RNA	1,107	2,680	1,574 bp	+	38.3%
tRNA-Leu (UUR)	Transfer RNA	2,681	2,754	74 bp	+	–
ND1	Protein-coding gene	2,759	3,715	957 bp	+	41.1%
tRNA-Ile	Transfer RNA	3,716	3,784	69 bp	+	–
tRNA-Gln	Transfer RNA	3,782	3,852	71 bp	−	–
tRNA-Met	Transfer RNA	3,855	3,923	69 bp	+	–
ND2	Protein-coding gene	3,924	4,965	1,042 bp	+	36.8%
tRNA-Trp	Transfer RNA	4,966	5,031	66 bp	+	–
tRNA-Ala	Transfer RNA	5,035	5,107	73 bp	−	–
tRNA-Asn	Transfer RNA	5,111	5,183	73 bp	−	–
tRNA-Cys	Transfer RNA	5,215	5,281	67 bp	−	–
tRNA-Tyr	Transfer RNA	5,282	5,355	74 bp	−	–
COX1	Protein-coding gene	5,356	6,897	1,542 bp	+	41.4%
tRNA-Ser (UCN)	Transfer RNA	6,901	6,969	69 bp	−	–
tRNA-Asp	Transfer RNA	6,973	7,041	69 bp	+	–
COX2	Protein-coding gene	7,042	7,725	684 bp	+	40.8%
tRNA-Lys	Transfer RNA	7,729	7,797	69 bp	+	–
ATP8	Protein-coding gene	7,799	8,002	204 bp	+	35.3%
ATP6	Protein-coding gene	7,960	8,639	680 bp	+	40.3%
COX3	Protein-coding gene	8,640	9,423	784 bp	+	43.4%
tRNA-Gly	Transfer RNA	9,424	9,494	71 bp	+	–
ND3	Protein-coding gene	9,495	9,841	347 bp	+	43.8%
tRNA-Arg	Transfer RNA	9,842	9,907	66 bp	+	–
ND4L	Protein-coding gene	9,909	10,205	297 bp	+	40.4%
ND4	Protein-coding gene	10,199	11,576	1,378 bp	+	36.7%
tRNA-His	Transfer RNA	11,577	11,645	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,646	11,704	59 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,705	11,774	70 bp	+	–
ND5	Protein-coding gene	11,775	13,592	1,818 bp	+	39.1%
ND6	Protein-coding gene	13,576	14,100	525 bp	−	37.1%
tRNA-Glu	Transfer RNA	14,101	14,169	69 bp	−	–
CYTB	Protein-coding gene	14,173	15,312	1,140 bp	+	43.2%
tRNA-Thr	Transfer RNA	15,313	15,382	70 bp	+	–
tRNA-Pro	Transfer RNA	15,387	15,454	68 bp	−	–
D-loop	Control region	15,532	16,507	976 bp	–	39.8%