Phanerodon furcatus
White seaperch
GC content
43.62%
Whole genome
Non-coding
884 bp
D-loop 814 bp
Where White seaperch sits among 2,335 species
Whole-genome GC content against maximum lifespan. White seaperch has the 1,746th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,524 bp
- GC skew (G − C) / (G + C)
- −0.263
- AT skew (A − T) / (A + T)
- −0.001
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,524 bp
Protein-coding11,452 bp
12S rRNA946 bp
16S rRNA1,693 bp
All tRNA1,549 bp
D-loop814 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 41.74% | −0.322 | −0.120 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 44.74% | −0.491 | −0.028 | |||||
| COX1Cytochrome c oxidase subunit I | 1,596 bp | 43.92% | −0.204 | −0.111 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.43% | −0.218 | −0.089 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 37.50% | −0.492 | −0.029 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 43.42% | −0.448 | −0.080 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 45.99% | −0.230 | −0.104 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 45.27% | −0.354 | −0.173 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 46.47% | −0.348 | −0.132 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 44.75% | −0.327 | −0.080 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 41.87% | −0.340 | −0.057 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 46.36% | −0.430 | +0.429 | |||||
| CYTBCytochrome b | 1,141 bp | 42.42% | −0.322 | −0.120 | |||||
| 12S rRNA12S ribosomal RNA | 946 bp | 48.31% | −0.055 | +0.211 | |||||
| 16S rRNA16S ribosomal RNA | 1,693 bp | 44.30% | −0.099 | +0.228 | |||||
| D-loopControl region (D-loop) | 814 bp | 36.00% | −0.208 | +0.029 |
Codon usage
Counts per codon, darker is more frequent3,822 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.4%
UUU144
UUC102
Leu L17.0%
UUA115
UUG23
CUU188
CUC136
CUA141
CUG46
Ile I7.3%
AUU192
AUC86
Met M4.4%
AUA117
AUG51
Val V5.5%
GUU73
GUC43
GUA74
GUG21
Ser S6.8%
UCU53
UCC83
UCA60
UCG8
AGU17
AGC40
Pro P5.6%
CCU76
CCC88
CCA46
CCG5
Thr T7.8%
ACU72
ACC115
ACA97
ACG13
Ala A9.1%
GCU111
GCC115
GCA108
GCG13
Tyr Y2.9%
UAU47
UAC64
His H2.7%
CAU44
CAC58
Gln Q2.7%
CAA92
CAG10
Asn N3.0%
AAU57
AAC57
Lys K1.9%
AAA65
AAG9
Asp D2.0%
GAU21
GAC56
Glu E2.6%
GAA82
GAG19
Cys C0.6%
UGU7
UGC16
Trp W3.1%
UGA99
UGG21
Arg R1.9%
CGU13
CGC13
CGA41
CGG7
Gly G6.4%
GGU43
GGC87
GGA74
GGG41
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_066927.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (43.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,015 | 946 bp | + | 48.3% |
| tRNA-Val | Transfer RNA | 1,016 | 1,087 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,088 | 2,780 | 1,693 bp | + | 44.3% |
| tRNA-Leu (UUR) | Transfer RNA | 2,781 | 2,854 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,855 | 3,829 | 975 bp | + | 41.7% |
| tRNA-Ile | Transfer RNA | 3,835 | 3,903 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,903 | 3,973 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,973 | 4,041 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,042 | 5,087 | 1,046 bp | + | 44.7% |
| tRNA-Trp | Transfer RNA | 5,088 | 5,159 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,161 | 5,229 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,232 | 5,304 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,339 | 5,404 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,406 | 5,472 | 67 bp | − | – |
| COX1 | Protein-coding gene | 5,474 | 7,069 | 1,596 bp | + | 43.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,070 | 7,140 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,144 | 7,215 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,225 | 7,915 | 691 bp | + | 44.4% |
| tRNA-Lys | Transfer RNA | 7,916 | 7,989 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,991 | 8,158 | 168 bp | + | 37.5% |
| ATP6 | Protein-coding gene | 8,149 | 8,832 | 684 bp | + | 43.4% |
| COX3 | Protein-coding gene | 8,832 | 9,616 | 785 bp | + | 46.0% |
| tRNA-Gly | Transfer RNA | 9,617 | 9,686 | 70 bp | + | – |
| ND3 | Protein-coding gene | 9,687 | 10,035 | 349 bp | + | 45.3% |
| tRNA-Arg | Transfer RNA | 10,036 | 10,104 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,105 | 10,401 | 297 bp | + | 46.5% |
| ND4 | Protein-coding gene | 10,395 | 11,775 | 1,381 bp | + | 44.8% |
| tRNA-His | Transfer RNA | 11,776 | 11,844 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,845 | 11,912 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,919 | 11,991 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,992 | 13,830 | 1,839 bp | + | 41.9% |
| ND6 | Protein-coding gene | 13,827 | 14,348 | 522 bp | − | 46.4% |
| tRNA-Glu | Transfer RNA | 14,349 | 14,418 | 70 bp | − | – |
| CYTB | Protein-coding gene | 14,423 | 15,563 | 1,141 bp | + | 42.4% |
| tRNA-Thr | Transfer RNA | 15,564 | 15,638 | 75 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,638 | 15,707 | 70 bp | − | – |
| D-loop | Control region | 15,711 | 16,524 | 814 bp | – | 36.0% |