MitoAge

Phascogale tapoatafa

Brush-tailed phascogale

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Maximum lifespan
5.9 yr
AnAge record
mtDNA size
17,405 bp
RefSeq NC_006523.1
GC content
39.39%
Whole genome
Non-coding
2,059 bp
D-loop 1,922 bp

Where Brush-tailed phascogale sits among 2,335 species

Whole-genome GC content against maximum lifespan. Brush-tailed phascogale has the 1,952nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Brush-tailed phascogale
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,405 bp
GC skew (G − C) / (G + C)
−0.278
AT skew (A − T) / (A + T)
+0.029

Life history

Maximum lifespan
5.9 years
Adult weight
193.5 g
Basal metabolic rate
0.694 W
Body temperature
37.4 °C
Female sexual maturity
365 days
Male sexual maturity
365 days
Gestation or incubation
29 days
Litter or clutch size
6.4
Litters per year
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02467)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome17,405 bp
Protein-coding11,327 bp
12S rRNA953 bp
16S rRNA1,572 bp
All tRNA1,506 bp
D-loop1,922 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp26.2%33.1%13.4%27.3%40.65%−0.342−0.116
ND2NADH dehydrogenase subunit 21,044 bp30.4%30.4%11.8%27.5%39.27%−0.4000.000
COX1Cytochrome c oxidase subunit I1,542 bp27.5%31.4%15.9%25.2%41.12%−0.227−0.066
COX2Cytochrome c oxidase subunit II682 bp31.2%28.4%14.1%26.2%40.32%−0.302+0.047
ATP8ATP synthase F0 subunit 8210 bp31.4%31.9%11.9%24.8%36.67%−0.351−0.008
ATP6ATP synthase F0 subunit 6681 bp28.8%32.0%10.1%29.1%39.21%−0.483−0.053
COX3Cytochrome c oxidase subunit III784 bp26.3%30.0%14.9%28.8%43.75%−0.318−0.066
ND3NADH dehydrogenase subunit 3351 bp28.8%29.6%12.5%29.1%41.60%−0.397−0.015
ND4LNADH dehydrogenase subunit 4L297 bp25.6%34.0%13.8%26.6%40.40%−0.317−0.141
ND4NADH dehydrogenase subunit 41,378 bp29.6%30.0%11.0%29.3%40.35%−0.453−0.007
ND5NADH dehydrogenase subunit 51,807 bp32.4%29.4%11.0%27.3%38.24%−0.427+0.048
ND6NADH dehydrogenase subunit 6501 bp43.3%19.0%8.2%29.5%37.73%−0.566+0.391
CYTBCytochrome b1,146 bp27.5%27.6%13.2%31.8%44.94%−0.414−0.002
12S rRNA12S ribosomal RNA953 bp32.8%24.6%21.4%21.2%42.60%+0.005+0.144
16S rRNA16S ribosomal RNA1,572 bp34.6%26.7%18.3%20.4%38.68%−0.053+0.129
D-loopControl region (D-loop)1,922 bp33.2%32.6%16.6%17.4%34.08%−0.024+0.010

Codon usage

Counts per codon, darker is more frequent

3,792 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.3%
UUU98
UUC139
Leu L16.7%
UUA122
UUG26
CUU118
CUC137
CUA198
CUG34
Ile I9.1%
AUU184
AUC161
Met M5.8%
AUA176
AUG44
Val V4.6%
GUU52
GUC34
GUA66
GUG21
Ser S7.1%
UCU58
UCC72
UCA84
UCG5
AGU14
AGC35
Pro P5.2%
CCU65
CCC56
CCA71
CCG6
Thr T7.9%
ACU77
ACC86
ACA127
ACG8
Ala A6.9%
GCU81
GCC98
GCA76
GCG8
Tyr Y3.2%
UAU57
UAC64
His H2.9%
CAU48
CAC61
Gln Q2.3%
CAA78
CAG9
Asn N4.0%
AAU67
AAC83
Lys K2.3%
AAA81
AAG7
Asp D1.8%
GAU36
GAC31
Glu E2.5%
GAA75
GAG21
Cys C0.9%
UGU15
UGC20
Trp W2.8%
UGA93
UGG14
Arg R1.7%
CGU10
CGC9
CGA44
CGG3
Gly G5.8%
GGU48
GGC64
GGA78
GGG30
Stop 0.2%
UAA4
UAG4
AGA1
AGG0

Genome map

38 annotated features in NC_006523.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA711,023953 bp+42.6%
tRNA-ValTransfer RNA1,0241,09269 bp+–
16S rRNARibosomal RNA1,0932,6641,572 bp+38.7%
tRNA-Leu (UUR)Transfer RNA2,6702,74374 bp+–
ND1Protein-coding gene2,7453,701957 bp+40.7%
tRNA-IleTransfer RNA3,7003,76869 bp+–
tRNA-GlnTransfer RNA3,7663,83671 bp−–
tRNA-MetTransfer RNA3,8363,90469 bp+–
ND2Protein-coding gene3,9054,9481,044 bp+39.3%
tRNA-AlaTransfer RNA4,9505,01869 bp−–
tRNA-CysTransfer RNA5,0235,08765 bp−–
tRNA-TrpTransfer RNA5,0935,16270 bp+–
tRNA-AsnTransfer RNA5,2225,29372 bp−–
tRNA-TyrTransfer RNA5,3005,36869 bp−–
COX1Protein-coding gene5,3706,9111,542 bp+41.1%
tRNA-Ser (UCN)Transfer RNA6,9156,98470 bp−–
tRNA-AspTransfer RNA6,9897,05870 bp+–
COX2Protein-coding gene7,0617,742682 bp+40.3%
tRNA-LysTransfer RNA7,7397,80466 bp+–
ATP8Protein-coding gene7,8058,014210 bp+36.7%
ATP6Protein-coding gene7,9698,649681 bp+39.2%
COX3Protein-coding gene8,6849,467784 bp+43.8%
tRNA-GlyTransfer RNA9,4689,53669 bp+–
ND3Protein-coding gene9,5349,884351 bp+41.6%
tRNA-ArgTransfer RNA9,8839,95169 bp+–
ND4LProtein-coding gene9,95210,248297 bp+40.4%
ND4Protein-coding gene10,24211,6191,378 bp+40.4%
tRNA-HisTransfer RNA11,62011,68869 bp+–
tRNA-Ser (AGY)Transfer RNA11,69011,74556 bp+–
tRNA-Leu (CUN)Transfer RNA11,74711,81872 bp+–
ND5Protein-coding gene11,81813,6241,807 bp+38.2%
ND6Protein-coding gene13,62614,126501 bp−37.7%
tRNA-GluTransfer RNA14,13014,19869 bp−–
CYTBProtein-coding gene14,20115,3461,146 bp+44.9%
tRNA-ThrTransfer RNA15,34715,41468 bp+–
tRNA-ProTransfer RNA15,41715,48367 bp−–
D-loopControl region15,48417,4051,922 bp–34.1%

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