MitoAge

Picoides tridactylus

Eurasian three-toed woodpecker, or Three-toed woodpecker

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Maximum lifespan
11.2 yr
AnAge record
mtDNA size
16,840 bp
RefSeq NC_088452.1
GC content
47.51%
Whole genome
Non-coding
1,492 bp
D-loop 787 bp

Where Eurasian three-toed woodpecker, or Three-toed woodpecker sits among 2,335 species

Whole-genome GC content against maximum lifespan. Eurasian three-toed woodpecker, or Three-toed woodpecker has the 1,478th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Eurasian three-toed woodpecker, or Three-toed woodpecker
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,840 bp
GC skew (G − C) / (G + C)
−0.415
AT skew (A − T) / (A + T)
+0.074

Life history

Maximum lifespan
11.2 years
Adult weight
65.7 g

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01425)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,840 bp
Protein-coding11,366 bp
12S rRNA970 bp
16S rRNA1,494 bp
All tRNA1,529 bp
D-loop787 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp24.4%25.7%12.2%37.7%49.90%−0.512−0.024
ND2NADH dehydrogenase subunit 21,040 bp29.3%23.6%8.4%38.8%47.12%−0.645+0.109
COX1Cytochrome c oxidase subunit I1,551 bp25.9%25.7%16.4%32.0%48.42%−0.324+0.005
COX2Cytochrome c oxidase subunit II684 bp27.9%27.2%15.1%29.8%44.88%−0.329+0.013
ATP8ATP synthase F0 subunit 8168 bp31.0%26.8%7.1%35.1%42.26%−0.662+0.072
ATP6ATP synthase F0 subunit 6684 bp25.0%25.0%12.0%38.0%50.00%−0.5200.000
COX3Cytochrome c oxidase subunit III784 bp25.0%25.4%15.8%33.8%49.62%−0.362−0.008
ND3NADH dehydrogenase subunit 3351 bp26.5%25.6%11.7%36.2%47.86%−0.512+0.016
ND4LNADH dehydrogenase subunit 4L297 bp25.9%25.6%14.1%34.3%48.49%−0.417+0.007
ND4NADH dehydrogenase subunit 41,368 bp27.9%24.0%9.2%38.8%48.03%−0.616+0.075
ND5NADH dehydrogenase subunit 51,815 bp28.7%24.0%10.7%36.6%47.38%−0.547+0.089
ND6NADH dehydrogenase subunit 6522 bp40.2%12.6%8.4%38.7%47.13%−0.642+0.522
CYTBCytochrome b1,142 bp24.8%26.3%13.0%36.0%48.95%−0.470−0.029
12S rRNA12S ribosomal RNA970 bp30.0%18.5%19.6%32.0%51.55%−0.240+0.238
16S rRNA16S ribosomal RNA1,494 bp32.2%19.5%19.7%28.6%48.26%−0.184+0.245
D-loopControl region (D-loop)787 bp22.6%33.9%18.3%25.2%43.46%−0.158−0.200

Codon usage

Counts per codon, darker is more frequent

3,793 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%
UUU54
UUC166
Leu L18.0%
UUA65
UUG23
CUU99
CUC254
CUA210
CUG33
Ile I8.0%
AUU90
AUC213
Met M3.7%
AUA115
AUG27
Val V4.3%
GUU41
GUC50
GUA53
GUG20
Ser S7.9%
UCU29
UCC112
UCA95
UCG7
AGU9
AGC48
Pro P6.1%
CCU37
CCC129
CCA60
CCG6
Thr T9.0%
ACU64
ACC157
ACA115
ACG6
Ala A7.8%
GCU50
GCC160
GCA73
GCG12
Tyr Y2.9%
UAU37
UAC73
His H2.7%
CAU17
CAC85
Gln Q2.4%
CAA82
CAG9
Asn N3.4%
AAU20
AAC109
Lys K2.2%
AAA78
AAG5
Asp D1.7%
GAU18
GAC47
Glu E2.5%
GAA81
GAG14
Cys C0.8%
UGU8
UGC21
Trp W2.9%
UGA94
UGG15
Arg R1.9%
CGU11
CGC27
CGA28
CGG5
Gly G5.7%
GGU29
GGC82
GGA78
GGG28
Stop 0.3%
UAA6
UAG1
AGA1
AGG2

Genome map

38 annotated features in NC_088452.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (47.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA711,040970 bp+51.6%
tRNA-ValTransfer RNA1,0421,11473 bp+–
16S rRNARibosomal RNA1,1592,6521,494 bp+48.3%
tRNA-Leu (UUR)Transfer RNA2,7082,78174 bp+–
ND1Protein-coding gene2,7903,767978 bp+49.9%
tRNA-IleTransfer RNA3,7663,83772 bp+–
tRNA-GlnTransfer RNA3,8623,93170 bp−–
tRNA-MetTransfer RNA3,9363,99358 bp+–
ND2Protein-coding gene4,0005,0391,040 bp+47.1%
tRNA-TrpTransfer RNA5,0405,11475 bp+–
tRNA-AlaTransfer RNA5,1165,18469 bp−–
tRNA-AsnTransfer RNA5,1915,26474 bp−–
tRNA-CysTransfer RNA5,2715,33161 bp−–
tRNA-TyrTransfer RNA5,3375,40771 bp−–
COX1Protein-coding gene5,4096,9591,551 bp+48.4%
tRNA-Ser (UCN)Transfer RNA6,9517,02474 bp−–
tRNA-AspTransfer RNA7,0287,09568 bp+–
COX2Protein-coding gene7,0987,781684 bp+44.9%
tRNA-LysTransfer RNA7,7837,85169 bp+–
ATP8Protein-coding gene7,8538,020168 bp+42.3%
ATP6Protein-coding gene8,0118,694684 bp+50.0%
COX3Protein-coding gene8,6949,477784 bp+49.6%
tRNA-GlyTransfer RNA9,4789,54669 bp+–
ND3Protein-coding gene9,5479,898352 bp+47.9%
tRNA-ArgTransfer RNA9,9019,96868 bp+–
ND4LProtein-coding gene9,97110,267297 bp+48.5%
ND4Protein-coding gene10,26111,6281,368 bp+48.0%
tRNA-HisTransfer RNA11,63811,70669 bp+–
tRNA-Ser (AGY)Transfer RNA11,70711,77165 bp+–
tRNA-Leu (CUN)Transfer RNA11,77111,84171 bp+–
ND5Protein-coding gene11,84213,6561,815 bp+47.4%
CYTBProtein-coding gene13,67014,8111,142 bp+49.0%
tRNA-ThrTransfer RNA14,81214,88271 bp+–
D-loopControl region14,92415,761838 bp–43.5%
tRNA-ProTransfer RNA16,10216,17170 bp−–
ND6Protein-coding gene16,17716,698522 bp−47.1%
tRNA-GluTransfer RNA16,70316,77169 bp−–

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