Planiliza macrolepis
Largescale mullet
GC content
46.28%
Whole genome
Non-coding
1,188 bp
D-loop 1,094 bp
Where Largescale mullet sits among 2,335 species
Whole-genome GC content against maximum lifespan. Largescale mullet has the 1,947th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,832 bp
- GC skew (G − C) / (G + C)
- −0.302
- AT skew (A − T) / (A + T)
- +0.036
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,832 bp
Protein-coding11,458 bp
12S rRNA945 bp
16S rRNA1,689 bp
All tRNA1,552 bp
D-loop1,094 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 47.39% | −0.390 | −0.084 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 50.43% | −0.457 | +0.008 | |||||
| COX1Cytochrome c oxidase subunit I | 1,596 bp | 47.12% | −0.239 | −0.052 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 45.59% | −0.276 | +0.011 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 50.00% | −0.500 | +0.024 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 45.32% | −0.452 | −0.048 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 47.83% | −0.312 | −0.066 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 47.56% | −0.373 | −0.158 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.82% | −0.352 | −0.105 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 48.15% | −0.362 | −0.017 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,848 bp | 46.48% | −0.434 | +0.011 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 49.23% | −0.471 | +0.419 | |||||
| CYTBCytochrome b | 1,140 bp | 47.02% | −0.384 | −0.033 | |||||
| 12S rRNA12S ribosomal RNA | 945 bp | 48.36% | −0.125 | +0.164 | |||||
| 16S rRNA16S ribosomal RNA | 1,689 bp | 45.12% | −0.113 | +0.197 | |||||
| D-loopControl region (D-loop) | 1,094 bp | 37.20% | −0.160 | +0.054 |
Codon usage
Counts per codon, darker is more frequent3,825 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU77
UUC158
Leu L17.7%
UUA88
UUG21
CUU125
CUC193
CUA206
CUG43
Ile I7.5%
AUU131
AUC154
Met M3.8%
AUA77
AUG68
Val V5.6%
GUU51
GUC70
GUA73
GUG21
Ser S6.5%
UCU42
UCC89
UCA57
UCG6
AGU14
AGC40
Pro P5.9%
CCU61
CCC98
CCA54
CCG11
Thr T7.4%
ACU60
ACC114
ACA94
ACG15
Ala A9.4%
GCU77
GCC145
GCA119
GCG19
Tyr Y2.9%
UAU33
UAC78
His H2.7%
CAU30
CAC74
Gln Q2.5%
CAA84
CAG12
Asn N3.1%
AAU27
AAC90
Lys K2.0%
AAA70
AAG7
Asp D2.0%
GAU18
GAC57
Glu E2.6%
GAA78
GAG23
Cys C0.7%
UGU8
UGC19
Trp W3.1%
UGA104
UGG14
Arg R2.0%
CGU8
CGC21
CGA40
CGG9
Gly G6.3%
GGU38
GGC96
GGA63
GGG45
Stop 0.2%
UAA7
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_027239.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,014 | 945 bp | + | 48.4% |
| tRNA-Val | Transfer RNA | 1,015 | 1,086 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,087 | 2,775 | 1,689 bp | + | 45.1% |
| tRNA-Leu (UUR) | Transfer RNA | 2,776 | 2,849 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,852 | 3,826 | 975 bp | + | 47.4% |
| tRNA-Ile | Transfer RNA | 3,830 | 3,899 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,899 | 3,969 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,969 | 4,038 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,039 | 5,083 | 1,045 bp | + | 50.4% |
| tRNA-Trp | Transfer RNA | 5,084 | 5,155 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,157 | 5,225 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,227 | 5,299 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,332 | 5,397 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,398 | 5,464 | 67 bp | − | – |
| COX1 | Protein-coding gene | 5,472 | 7,067 | 1,596 bp | + | 47.1% |
| tRNA-Ser (UCN) | Transfer RNA | 7,069 | 7,139 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,143 | 7,215 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,220 | 7,910 | 691 bp | + | 45.6% |
| tRNA-Lys | Transfer RNA | 7,911 | 7,984 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,986 | 8,153 | 168 bp | + | 50.0% |
| ATP6 | Protein-coding gene | 8,144 | 8,827 | 684 bp | + | 45.3% |
| COX3 | Protein-coding gene | 8,827 | 9,610 | 784 bp | + | 47.8% |
| tRNA-Gly | Transfer RNA | 9,611 | 9,683 | 73 bp | + | – |
| ND3 | Protein-coding gene | 9,684 | 10,032 | 349 bp | + | 47.6% |
| tRNA-Arg | Transfer RNA | 10,033 | 10,101 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,102 | 10,398 | 297 bp | + | 48.8% |
| ND4 | Protein-coding gene | 10,392 | 11,772 | 1,381 bp | + | 48.2% |
| tRNA-His | Transfer RNA | 11,773 | 11,841 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,843 | 11,909 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,912 | 11,984 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,988 | 13,835 | 1,848 bp | + | 46.5% |
| ND6 | Protein-coding gene | 13,832 | 14,353 | 522 bp | − | 49.2% |
| tRNA-Glu | Transfer RNA | 14,354 | 14,422 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,427 | 15,566 | 1,140 bp | + | 47.0% |
| tRNA-Thr | Transfer RNA | 15,568 | 15,639 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,668 | 15,738 | 71 bp | − | – |
| D-loop | Control region | 15,739 | 16,832 | 1,094 bp | – | 37.2% |