MitoAge

Platalea leucorodia

Eurasian spoonbill

Add to compare Download FASTA
Maximum lifespan
30.1 yr
AnAge record
mtDNA size
16,715 bp
RefSeq NC_012772.1
GC content
44.74%
Whole genome
Non-coding
1,212 bp
D-loop 1,140 bp

Where Eurasian spoonbill sits among 2,335 species

Whole-genome GC content against maximum lifespan. Eurasian spoonbill has the 436th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Eurasian spoonbill
  • This species
  • Other birds
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,715 bp
GC skew (G − C) / (G + C)
−0.380
AT skew (A − T) / (A + T)
+0.117

Life history

Maximum lifespan
30.1 years
Adult weight
1.9 kg
Female sexual maturity
3 years
Male sexual maturity
3 years
Postnatal growth rate
0.174 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01387)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,715 bp
Protein-coding11,377 bp
12S rRNA974 bp
16S rRNA1,599 bp
All tRNA1,564 bp
D-loop1,140 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp27.1%27.6%13.7%31.6%45.30%−0.395−0.009
ND2NADH dehydrogenase subunit 21,040 bp31.9%24.9%9.4%33.8%43.17%−0.563+0.124
COX1Cytochrome c oxidase subunit I1,551 bp28.8%25.9%16.1%29.2%45.26%−0.291+0.053
COX2Cytochrome c oxidase subunit II684 bp31.4%24.7%14.0%29.8%43.86%−0.360+0.120
ATP8ATP synthase F0 subunit 8168 bp31.0%25.6%7.7%35.7%43.45%−0.644+0.095
ATP6ATP synthase F0 subunit 6684 bp30.3%24.4%10.2%35.1%45.32%−0.548+0.107
COX3Cytochrome c oxidase subunit III784 bp28.8%25.0%14.5%31.6%46.17%−0.370+0.071
ND3NADH dehydrogenase subunit 3351 bp28.8%24.8%11.1%35.3%46.44%−0.521+0.074
ND4LNADH dehydrogenase subunit 4L297 bp27.6%23.9%13.1%35.4%48.49%−0.458+0.072
ND4NADH dehydrogenase subunit 41,378 bp31.5%23.9%10.4%34.1%44.56%−0.531+0.136
ND5NADH dehydrogenase subunit 51,815 bp32.3%23.3%11.3%33.2%44.46%−0.492+0.163
ND6NADH dehydrogenase subunit 6522 bp39.5%12.3%9.0%39.3%48.28%−0.627+0.526
CYTBCytochrome b1,143 bp27.8%25.1%11.7%35.3%47.07%−0.502+0.051
12S rRNA12S ribosomal RNA974 bp31.0%22.2%20.7%26.1%46.82%−0.114+0.166
16S rRNA16S ribosomal RNA1,599 bp34.4%22.0%18.1%25.5%43.59%−0.171+0.220
D-loopControl region (D-loop)1,140 bp26.3%29.7%16.8%27.2%43.95%−0.238−0.061

Codon usage

Counts per codon, darker is more frequent

3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.7%
UUU69
UUC147
Leu L17.6%
UUA78
UUG20
CUU73
CUC165
CUA295
CUG38
Ile I7.5%
AUU79
AUC207
Met M4.6%
AUA142
AUG31
Val V4.6%
GUU39
GUC45
GUA73
GUG16
Ser S7.6%
UCU41
UCC78
UCA106
UCG9
AGU13
AGC41
Pro P5.7%
CCU23
CCC80
CCA108
CCG6
Thr T9.3%
ACU63
ACC142
ACA145
ACG5
Ala A7.6%
GCU58
GCC115
GCA107
GCG8
Tyr Y2.9%
UAU26
UAC83
His H2.9%
CAU23
CAC89
Gln Q2.7%
CAA91
CAG10
Asn N3.3%
AAU22
AAC104
Lys K2.3%
AAA78
AAG8
Asp D1.7%
GAU20
GAC46
Glu E2.5%
GAA80
GAG14
Cys C0.7%
UGU8
UGC18
Trp W2.8%
UGA98
UGG9
Arg R1.9%
CGU9
CGC20
CGA40
CGG2
Gly G5.9%
GGU26
GGC71
GGA95
GGG32
Stop 0.3%
UAA6
UAG1
AGA2
AGG1

Genome map

38 annotated features in NC_012772.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (44.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
D-loopControl region11,1401,140 bp–44.0%
tRNA-PheTransfer RNA1,1411,20868 bp+–
12S rRNARibosomal RNA1,2092,182974 bp+46.8%
tRNA-ValTransfer RNA2,1832,25472 bp+–
16S rRNARibosomal RNA2,2553,8531,599 bp+43.6%
tRNA-Leu (UUR)Transfer RNA3,8543,92875 bp+–
ND1Protein-coding gene3,9404,917978 bp+45.3%
tRNA-IleTransfer RNA4,9165,00388 bp+–
tRNA-GlnTransfer RNA5,0135,08371 bp−–
tRNA-MetTransfer RNA5,0835,15169 bp+–
ND2Protein-coding gene5,1526,1911,040 bp+43.2%
tRNA-TrpTransfer RNA6,1926,26170 bp+–
tRNA-AlaTransfer RNA6,2636,33169 bp−–
tRNA-AsnTransfer RNA6,3346,40673 bp−–
tRNA-CysTransfer RNA6,4076,47569 bp−–
tRNA-TyrTransfer RNA6,4756,54571 bp−–
COX1Protein-coding gene6,5478,0971,551 bp+45.3%
tRNA-Ser (UCN)Transfer RNA8,0898,16173 bp−–
tRNA-AspTransfer RNA8,1658,23369 bp+–
COX2Protein-coding gene8,2358,918684 bp+43.9%
tRNA-LysTransfer RNA8,9198,99173 bp+–
ATP8Protein-coding gene8,9939,160168 bp+43.5%
ATP6Protein-coding gene9,1519,834684 bp+45.3%
COX3Protein-coding gene9,83410,617784 bp+46.2%
tRNA-GlyTransfer RNA10,61810,68669 bp+–
ND3Protein-coding gene10,68711,038352 bp+46.4%
tRNA-ArgTransfer RNA11,04111,10969 bp+–
ND4LProtein-coding gene11,11111,407297 bp+48.5%
ND4Protein-coding gene11,40112,7781,378 bp+44.6%
tRNA-HisTransfer RNA12,77912,84870 bp+–
tRNA-Ser (AGY)Transfer RNA12,84912,91466 bp+–
tRNA-Leu (CUN)Transfer RNA12,91412,98471 bp+–
ND5Protein-coding gene12,98514,7991,815 bp+44.5%
CYTBProtein-coding gene14,81015,9521,143 bp+47.1%
tRNA-ThrTransfer RNA15,95616,02469 bp+–
tRNA-ProTransfer RNA16,04316,11270 bp−–
ND6Protein-coding gene16,11816,639522 bp−48.3%
tRNA-GluTransfer RNA16,64316,71573 bp−–

Downloads