Pleoticus muelleri
Argentine red shrimp
GC content
31.78%
Whole genome
Non-coding
1,447 bp
D-loop 1,252 bp
Where Argentine red shrimp sits among 2,335 species
Whole-genome GC content against maximum lifespan. Argentine red shrimp has the 2,250th longest lifespan of them.
- This species
- All other species
Base composition
Whole genome16,189 bp
- GC skew (G − C) / (G + C)
- −0.245
- AT skew (A − T) / (A + T)
- +0.028
About this record
- Lifespan source
- SeaLifeBase v26.06
- Based on
- an estimate, not an observed animal
- Data quality
- low
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,189 bp
Protein-coding11,139 bp
12S rRNA850 bp
16S rRNA1,260 bp
All tRNA1,504 bp
D-loop1,252 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 939 bp | 31.63% | −0.239 | +0.227 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,002 bp | 33.63% | −0.318 | −0.137 | |||||
| COX1Cytochrome c oxidase subunit I | 1,531 bp | 36.58% | −0.096 | −0.081 | |||||
| COX2Cytochrome c oxidase subunit II | 688 bp | 34.74% | −0.146 | −0.060 | |||||
| ATP8ATP synthase F0 subunit 8 | 159 bp | 23.27% | −0.568 | +0.066 | |||||
| ATP6ATP synthase F0 subunit 6 | 675 bp | 35.41% | −0.297 | −0.092 | |||||
| COX3Cytochrome c oxidase subunit III | 790 bp | 37.98% | −0.160 | −0.098 | |||||
| ND3NADH dehydrogenase subunit 3 | 352 bp | 34.38% | −0.256 | −0.117 | |||||
| ND4LNADH dehydrogenase subunit 4L | 300 bp | 29.67% | −0.483 | +0.308 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,341 bp | 30.57% | −0.361 | +0.237 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,724 bp | 30.39% | −0.263 | +0.208 | |||||
| ND6NADH dehydrogenase subunit 6 | 516 bp | 28.49% | −0.456 | −0.149 | |||||
| CYTBCytochrome b | 1,137 bp | 37.03% | −0.249 | −0.084 | |||||
| 12S rRNA12S ribosomal RNA | 850 bp | 31.41% | −0.303 | +0.022 | |||||
| 16S rRNA16S ribosomal RNA | 1,260 bp | 27.30% | −0.291 | −0.022 | |||||
| D-loopControl region (D-loop) | 1,252 bp | 21.57% | −0.207 | +0.043 |
Codon usage
Counts per codon, darker is more frequent3,716 codons in all protein-coding genes. Grouped with the Invertebrate mitochondrial code (NCBI table 5).
Phe F8.1%
UUU215
UUC85
Leu L15.6%
UUA295
UUG66
CUU81
CUC43
CUA88
CUG6
Ile I8.2%
AUU235
AUC71
Met M5.8%
AUA189
AUG25
Val V6.6%
GUU84
GUC13
GUA114
GUG36
Ser S9.6%
UCU106
UCC27
UCA82
UCG13
AGU34
AGC11
AGA74
AGG8
Pro P4.0%
CCU67
CCC28
CCA46
CCG9
Thr T5.4%
ACU92
ACC28
ACA75
ACG6
Ala A6.4%
GCU119
GCC62
GCA47
GCG11
Tyr Y3.8%
UAU101
UAC41
His H2.2%
CAU44
CAC39
Gln Q2.0%
CAA64
CAG10
Asn N3.5%
AAU95
AAC34
Lys K2.3%
AAA58
AAG28
Asp D2.1%
GAU52
GAC25
Glu E2.2%
GAA62
GAG19
Cys C1.1%
UGU36
UGC5
Trp W2.7%
UGA82
UGG19
Arg R1.6%
CGU16
CGC5
CGA29
CGG9
Gly G6.6%
GGU58
GGC11
GGA111
GGG64
Stop 0.2%
UAA6
UAG2
Genome map
38 annotated features in NC_039964.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (31.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Ile | Transfer RNA | 1 | 69 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 83 | 152 | 70 bp | − | – |
| tRNA-Met | Transfer RNA | 173 | 242 | 70 bp | + | – |
| ND2 | Protein-coding gene | 242 | 1,243 | 1,002 bp | + | 33.6% |
| tRNA-Trp | Transfer RNA | 1,241 | 1,311 | 71 bp | + | – |
| tRNA-Cys | Transfer RNA | 1,313 | 1,378 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 1,380 | 1,446 | 67 bp | − | – |
| COX1 | Protein-coding gene | 1,454 | 2,984 | 1,531 bp | + | 36.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,984 | 3,051 | 68 bp | + | – |
| COX2 | Protein-coding gene | 3,054 | 3,741 | 688 bp | + | 34.7% |
| tRNA-Lys | Transfer RNA | 3,741 | 3,811 | 71 bp | + | – |
| tRNA-Asp | Transfer RNA | 3,811 | 3,878 | 68 bp | + | – |
| ATP8 | Protein-coding gene | 3,879 | 4,037 | 159 bp | + | 23.3% |
| ATP6 | Protein-coding gene | 4,031 | 4,705 | 675 bp | + | 35.4% |
| COX3 | Protein-coding gene | 4,709 | 5,498 | 790 bp | + | 38.0% |
| tRNA-Gly | Transfer RNA | 5,498 | 5,565 | 68 bp | + | – |
| ND3 | Protein-coding gene | 5,565 | 5,916 | 352 bp | + | 34.4% |
| tRNA-Ala | Transfer RNA | 5,916 | 5,985 | 70 bp | + | – |
| tRNA-Arg | Transfer RNA | 5,984 | 6,049 | 66 bp | + | – |
| tRNA-Asn | Transfer RNA | 6,049 | 6,116 | 68 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 6,115 | 6,183 | 69 bp | + | – |
| tRNA-Glu | Transfer RNA | 6,184 | 6,252 | 69 bp | + | – |
| tRNA-Phe | Transfer RNA | 6,269 | 6,334 | 66 bp | − | – |
| ND5 | Protein-coding gene | 6,335 | 8,058 | 1,724 bp | − | 30.4% |
| tRNA-His | Transfer RNA | 8,068 | 8,134 | 67 bp | − | – |
| ND4 | Protein-coding gene | 8,135 | 9,475 | 1,341 bp | − | 30.6% |
| ND4L | Protein-coding gene | 9,469 | 9,768 | 300 bp | − | 29.7% |
| tRNA-Thr | Transfer RNA | 9,771 | 9,837 | 67 bp | + | – |
| tRNA-Pro | Transfer RNA | 9,838 | 9,903 | 66 bp | − | – |
| ND6 | Protein-coding gene | 9,905 | 10,420 | 516 bp | + | 28.5% |
| CYTB | Protein-coding gene | 10,420 | 11,556 | 1,137 bp | + | 37.0% |
| tRNA-Ser (UCN) | Transfer RNA | 11,555 | 11,624 | 70 bp | + | – |
| ND1 | Protein-coding gene | 11,644 | 12,582 | 939 bp | − | 31.6% |
| tRNA-Leu (CUN) | Transfer RNA | 12,587 | 12,656 | 70 bp | − | – |
| 16S rRNA | Ribosomal RNA | 12,678 | 13,937 | 1,260 bp | − | 27.3% |
| tRNA-Val | Transfer RNA | 14,011 | 14,084 | 74 bp | − | – |
| 12S rRNA | Ribosomal RNA | 14,088 | 14,937 | 850 bp | − | 31.4% |
| D-loop | Control region | 14,938 | 16,189 | 1,252 bp | – | 21.6% |