Pleurogrammus azonus
Okhotsk atka mackerel
GC content
46.00%
Whole genome
Non-coding
995 bp
D-loop 1,008 bp
Where Okhotsk atka mackerel sits among 2,335 species
Whole-genome GC content against maximum lifespan. Okhotsk atka mackerel has the 1,432nd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,591 bp
- GC skew (G − C) / (G + C)
- −0.251
- AT skew (A − T) / (A + T)
- −0.002
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,591 bp
Protein-coding11,407 bp
12S rRNA945 bp
16S rRNA1,687 bp
All tRNA1,557 bp
D-loop1,008 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 47.80% | −0.322 | −0.147 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 47.71% | −0.459 | −0.002 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 46.55% | −0.172 | −0.144 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.14% | −0.213 | −0.016 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 44.05% | −0.405 | +0.085 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 46.85% | −0.444 | −0.102 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 47.39% | −0.220 | −0.109 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 48.71% | −0.341 | −0.196 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.51% | −0.360 | −0.116 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.63% | −0.351 | −0.053 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 44.75% | −0.327 | −0.069 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 45.59% | −0.395 | +0.366 | |||||
| CYTBCytochrome b | 1,141 bp | 45.40% | −0.347 | −0.111 | |||||
| 12S rRNA12S ribosomal RNA | 945 bp | 47.62% | −0.093 | +0.200 | |||||
| 16S rRNA16S ribosomal RNA | 1,687 bp | 45.88% | −0.072 | +0.176 | |||||
| D-loopControl region (D-loop) | 1,008 bp | 37.80% | −0.076 | +0.033 |
Codon usage
Counts per codon, darker is more frequent3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU110
UUC125
Leu L17.3%
UUA108
UUG36
CUU186
CUC132
CUA151
CUG47
Ile I6.7%
AUU138
AUC116
Met M3.8%
AUA83
AUG62
Val V6.0%
GUU67
GUC58
GUA76
GUG28
Ser S6.7%
UCU55
UCC72
UCA52
UCG17
AGU19
AGC41
Pro P5.7%
CCU64
CCC101
CCA39
CCG12
Thr T8.9%
ACU63
ACC145
ACA110
ACG19
Ala A8.6%
GCU76
GCC154
GCA84
GCG12
Tyr Y2.9%
UAU38
UAC72
His H2.8%
CAU38
CAC68
Gln Q2.5%
CAA78
CAG19
Asn N3.0%
AAU50
AAC66
Lys K1.9%
AAA59
AAG14
Asp D1.9%
GAU27
GAC45
Glu E2.6%
GAA69
GAG30
Cys C0.6%
UGU7
UGC16
Trp W3.1%
UGA91
UGG26
Arg R2.1%
CGU16
CGC14
CGA38
CGG13
Gly G6.5%
GGU53
GGC92
GGA48
GGG55
Stop 0.2%
UAA6
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_023129.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,013 | 945 bp | + | 47.6% |
| tRNA-Val | Transfer RNA | 1,014 | 1,085 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,086 | 2,772 | 1,687 bp | + | 45.9% |
| tRNA-Leu (UUR) | Transfer RNA | 2,773 | 2,846 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,847 | 3,821 | 975 bp | + | 47.8% |
| tRNA-Ile | Transfer RNA | 3,826 | 3,895 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,895 | 3,965 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,965 | 4,033 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,034 | 5,079 | 1,046 bp | + | 47.7% |
| tRNA-Trp | Transfer RNA | 5,080 | 5,150 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,152 | 5,220 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,223 | 5,295 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,330 | 5,399 | 70 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,399 | 5,468 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,470 | 7,020 | 1,551 bp | + | 46.6% |
| tRNA-Ser (UCN) | Transfer RNA | 7,021 | 7,091 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,095 | 7,168 | 74 bp | + | – |
| COX2 | Protein-coding gene | 7,174 | 7,864 | 691 bp | + | 44.1% |
| tRNA-Lys | Transfer RNA | 7,865 | 7,938 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,940 | 8,107 | 168 bp | + | 44.1% |
| ATP6 | Protein-coding gene | 8,098 | 8,780 | 683 bp | + | 46.9% |
| COX3 | Protein-coding gene | 8,781 | 9,565 | 785 bp | + | 47.4% |
| tRNA-Gly | Transfer RNA | 9,566 | 9,637 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,638 | 9,986 | 349 bp | + | 48.7% |
| tRNA-Arg | Transfer RNA | 9,987 | 10,055 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,056 | 10,352 | 297 bp | + | 50.5% |
| ND4 | Protein-coding gene | 10,346 | 11,726 | 1,381 bp | + | 46.6% |
| tRNA-His | Transfer RNA | 11,727 | 11,795 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,795 | 11,866 | 72 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,868 | 11,940 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,941 | 13,779 | 1,839 bp | + | 44.8% |
| ND6 | Protein-coding gene | 13,776 | 14,297 | 522 bp | − | 45.6% |
| tRNA-Glu | Transfer RNA | 14,298 | 14,366 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,371 | 15,511 | 1,141 bp | + | 45.4% |
| tRNA-Thr | Transfer RNA | 15,512 | 15,583 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,583 | 15,652 | 70 bp | − | – |
| D-loop | Control region | 15,584 | 16,591 | 1,008 bp | – | 37.8% |