MitoAge

Prionailurus rubiginosus

Rusty-spotted cat

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Maximum lifespan
17.9 yr
AnAge record
mtDNA size
16,832 bp
RefSeq NC_028304.1
GC content
39.81%
Whole genome
Non-coding
1,449 bp
D-loop 1,386 bp

Where Rusty-spotted cat sits among 2,335 species

Whole-genome GC content against maximum lifespan. Rusty-spotted cat has the 1,060th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Rusty-spotted cat
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,832 bp
GC skew (G − C) / (G + C)
−0.314
AT skew (A − T) / (A + T)
+0.094

Life history

Maximum lifespan
17.9 years
Adult weight
1.4 kg
Gestation or incubation
68 days
Litter or clutch size
2.5

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02134)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,832 bp
Protein-coding11,339 bp
12S rRNA957 bp
16S rRNA1,573 bp
All tRNA1,516 bp
D-loop1,386 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp32.0%26.7%11.6%29.7%41.32%−0.438+0.091
ND2NADH dehydrogenase subunit 21,042 bp37.6%26.9%8.6%26.9%35.51%−0.514+0.167
COX1Cytochrome c oxidase subunit I1,545 bp27.9%32.0%16.8%23.3%40.13%−0.161−0.068
COX2Cytochrome c oxidase subunit II684 bp32.6%27.0%13.6%26.8%40.35%−0.326+0.093
ATP8ATP synthase F0 subunit 8204 bp41.7%27.5%6.4%24.5%30.88%−0.587+0.206
ATP6ATP synthase F0 subunit 6681 bp30.4%30.7%11.7%27.2%38.91%−0.396−0.005
COX3Cytochrome c oxidase subunit III784 bp28.1%29.8%14.7%27.4%42.09%−0.303−0.031
ND3NADH dehydrogenase subunit 3347 bp31.1%27.1%12.1%29.7%41.79%−0.421+0.069
ND4LNADH dehydrogenase subunit 4L297 bp31.0%32.7%11.8%24.6%36.36%−0.352−0.026
ND4NADH dehydrogenase subunit 41,378 bp32.9%28.4%11.5%27.1%38.61%−0.406+0.073
ND5NADH dehydrogenase subunit 51,830 bp32.1%28.1%11.7%28.1%39.78%−0.412+0.067
ND6NADH dehydrogenase subunit 6528 bp40.5%21.2%9.3%29.0%38.26%−0.515+0.313
CYTBCytochrome b1,140 bp28.7%25.9%13.8%31.7%45.44%−0.394+0.051
12S rRNA12S ribosomal RNA957 bp36.1%21.8%17.8%24.3%42.11%−0.156+0.245
16S rRNA16S ribosomal RNA1,573 bp37.0%24.0%17.9%21.1%39.03%−0.081+0.214
D-loopControl region (D-loop)1,386 bp31.5%26.4%14.3%27.8%42.06%−0.321+0.088

Codon usage

Counts per codon, darker is more frequent

3,803 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU103
UUC125
Leu L15.6%
UUA112
UUG19
CUU72
CUC85
CUA269
CUG35
Ile I8.8%
AUU162
AUC171
Met M6.7%
AUA200
AUG54
Val V4.9%
GUU33
GUC39
GUA97
GUG19
Ser S7.2%
UCU41
UCC62
UCA113
UCG13
AGU15
AGC31
Pro P5.1%
CCU40
CCC78
CCA72
CCG3
Thr T8.2%
ACU76
ACC96
ACA128
ACG11
Ala A6.7%
GCU61
GCC103
GCA87
GCG4
Tyr Y3.7%
UAU77
UAC64
His H2.5%
CAU34
CAC61
Gln Q2.4%
CAA80
CAG10
Asn N4.2%
AAU60
AAC99
Lys K2.7%
AAA95
AAG9
Asp D1.7%
GAU25
GAC41
Glu E2.6%
GAA85
GAG13
Cys C0.6%
UGU9
UGC15
Trp W2.8%
UGA86
UGG19
Arg R1.7%
CGU4
CGC13
CGA47
CGG2
Gly G5.7%
GGU42
GGC55
GGA96
GGG25
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_028304.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA85492370 bp+–
12S rRNARibosomal RNA9241,880957 bp+42.1%
tRNA-ValTransfer RNA1,8811,94868 bp+–
16S rRNARibosomal RNA1,9493,5211,573 bp+39.0%
tRNA-Leu (UUR)Transfer RNA3,5223,59675 bp+–
ND1Protein-coding gene3,5994,554956 bp+41.3%
tRNA-IleTransfer RNA4,5554,62369 bp+–
tRNA-GlnTransfer RNA4,6214,69474 bp−–
tRNA-MetTransfer RNA4,6964,76469 bp+–
ND2Protein-coding gene4,7655,8061,042 bp+35.5%
tRNA-TrpTransfer RNA5,8075,87569 bp+–
tRNA-AlaTransfer RNA5,8915,95969 bp−–
tRNA-AsnTransfer RNA5,9616,03373 bp−–
tRNA-CysTransfer RNA6,0666,13166 bp−–
tRNA-TyrTransfer RNA6,1326,19867 bp−–
COX1Protein-coding gene6,2007,7441,545 bp+40.1%
tRNA-Ser (UCN)Transfer RNA7,7437,81270 bp−–
tRNA-AspTransfer RNA7,8177,88569 bp+–
COX2Protein-coding gene7,8868,569684 bp+40.4%
tRNA-LysTransfer RNA8,5738,64068 bp+–
ATP8Protein-coding gene8,6428,845204 bp+30.9%
ATP6Protein-coding gene8,8039,483681 bp+38.9%
COX3Protein-coding gene9,48310,266784 bp+42.1%
tRNA-GlyTransfer RNA10,26710,33670 bp+–
ND3Protein-coding gene10,33710,683347 bp+41.8%
tRNA-ArgTransfer RNA10,68410,75269 bp+–
ND4LProtein-coding gene10,75311,049297 bp+36.4%
ND4Protein-coding gene11,04312,4201,378 bp+38.6%
tRNA-HisTransfer RNA12,42112,48969 bp+–
tRNA-Ser (AGY)Transfer RNA12,49012,54859 bp+–
tRNA-Leu (CUN)Transfer RNA12,54912,61870 bp+–
ND5Protein-coding gene12,61914,4481,830 bp+39.8%
ND6Protein-coding gene14,42314,950528 bp−38.3%
tRNA-GluTransfer RNA14,95115,01969 bp−–
CYTBProtein-coding gene15,02316,1621,140 bp+45.4%
tRNA-ThrTransfer RNA16,16316,23270 bp+–
tRNA-ProTransfer RNA16,23316,29967 bp−–
D-loopControl region16,3008531,386 bp–42.1%

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