Prionotus evolans
Striped searobin
GC content
47.54%
Whole genome
Non-coding
1,233 bp
Including the D-loop
Where Striped searobin sits among 2,335 species
Whole-genome GC content against maximum lifespan. Striped searobin has the 1,869th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,907 bp
- GC skew (G − C) / (G + C)
- −0.244
- AT skew (A − T) / (A + T)
- +0.005
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,907 bp
Protein-coding11,407 bp
12S rRNA948 bp
16S rRNA1,695 bp
All tRNA1,624 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 48.82% | −0.273 | −0.150 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 50.00% | −0.335 | −0.010 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 48.16% | −0.189 | −0.162 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 46.02% | −0.233 | +0.013 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 47.02% | −0.443 | +0.146 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 47.66% | −0.362 | −0.078 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.79% | −0.264 | −0.085 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 47.56% | −0.373 | −0.148 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 51.85% | −0.364 | −0.175 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 48.52% | −0.331 | −0.049 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 47.58% | −0.330 | −0.041 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 48.66% | −0.386 | +0.500 | |||||
| CYTBCytochrome b | 1,141 bp | 49.52% | −0.331 | −0.135 | |||||
| 12S rRNA12S ribosomal RNA | 948 bp | 50.00% | −0.072 | +0.181 | |||||
| 16S rRNA16S ribosomal RNA | 1,695 bp | 46.08% | −0.081 | +0.204 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.4%
UUU113
UUC132
Leu L17.3%
UUA77
UUG24
CUU166
CUC161
CUA165
CUG67
Ile I6.5%
AUU154
AUC95
Met M4.4%
AUA73
AUG96
Val V6.2%
GUU60
GUC65
GUA75
GUG35
Ser S6.1%
UCU38
UCC84
UCA48
UCG11
AGU9
AGC44
Pro P5.9%
CCU54
CCC107
CCA52
CCG11
Thr T7.3%
ACU61
ACC109
ACA86
ACG21
Ala A9.5%
GCU68
GCC179
GCA94
GCG21
Tyr Y3.0%
UAU44
UAC70
His H2.8%
CAU27
CAC79
Gln Q2.4%
CAA71
CAG19
Asn N2.8%
AAU28
AAC80
Lys K2.0%
AAA59
AAG18
Asp D2.1%
GAU16
GAC65
Glu E2.5%
GAA62
GAG34
Cys C0.8%
UGU13
UGC16
Trp W3.0%
UGA78
UGG37
Arg R2.0%
CGU10
CGC19
CGA34
CGG15
Gly G6.6%
GGU26
GGC108
GGA57
GGG60
Stop 0.2%
UAA5
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_083024.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA23
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,016 | 948 bp | + | 50.0% |
| tRNA-Val | Transfer RNA | 1,017 | 1,090 | 74 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,091 | 2,785 | 1,695 bp | + | 46.1% |
| tRNA-Leu | Transfer RNA | 2,786 | 2,859 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,860 | 3,834 | 975 bp | + | 48.8% |
| tRNA-Ile | Transfer RNA | 3,839 | 3,908 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,908 | 3,978 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,978 | 4,048 | 71 bp | + | – |
| ND2 | Protein-coding gene | 4,049 | 5,094 | 1,046 bp | + | 50.0% |
| tRNA-Trp | Transfer RNA | 5,095 | 5,165 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,167 | 5,235 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,237 | 5,309 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,349 | 5,413 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,414 | 5,483 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,485 | 7,035 | 1,551 bp | + | 48.2% |
| tRNA-Ser (UCN) | Transfer RNA | 7,036 | 7,106 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,110 | 7,182 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,191 | 7,881 | 691 bp | + | 46.0% |
| tRNA-Lys | Transfer RNA | 7,882 | 7,955 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,957 | 8,124 | 168 bp | + | 47.0% |
| ATP6 | Protein-coding gene | 8,115 | 8,798 | 684 bp | + | 47.7% |
| COX3 | Protein-coding gene | 8,798 | 9,582 | 785 bp | + | 48.8% |
| tRNA-Gly | Transfer RNA | 9,583 | 9,653 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,654 | 10,002 | 349 bp | + | 47.6% |
| tRNA-Arg | Transfer RNA | 10,003 | 10,071 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,072 | 10,368 | 297 bp | + | 51.9% |
| ND4 | Protein-coding gene | 10,362 | 11,742 | 1,381 bp | + | 48.5% |
| tRNA-His | Transfer RNA | 11,743 | 11,811 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,812 | 11,878 | 67 bp | + | – |
| tRNA-Leu | Transfer RNA | 11,885 | 11,957 | 73 bp | + | – |
| tRNA-Leu | Transfer RNA | 12,193 | 12,265 | 73 bp | + | – |
| ND5 | Protein-coding gene | 12,266 | 14,104 | 1,839 bp | + | 47.6% |
| ND6 | Protein-coding gene | 14,101 | 14,622 | 522 bp | − | 48.7% |
| tRNA-Glu | Transfer RNA | 14,623 | 14,690 | 68 bp | − | – |
| CYTB | Protein-coding gene | 14,696 | 15,836 | 1,141 bp | + | 49.5% |
| tRNA-Thr | Transfer RNA | 15,837 | 15,908 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,910 | 15,979 | 70 bp | − | – |