Pseudorasbora parva
Stone moroko
GC content
41.11%
Whole genome
Non-coding
994 bp
D-loop 931 bp
Where Stone moroko sits among 2,335 species
Whole-genome GC content against maximum lifespan. Stone moroko has the 2,004th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,600 bp
- GC skew (G − C) / (G + C)
- −0.195
- AT skew (A − T) / (A + T)
- +0.039
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,600 bp
Protein-coding11,405 bp
12S rRNA958 bp
16S rRNA1,682 bp
All tRNA1,561 bp
D-loop931 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 40.41% | −0.193 | −0.046 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 42.64% | −0.318 | +0.093 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 41.46% | −0.151 | −0.099 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 39.07% | −0.193 | +0.012 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 36.36% | −0.433 | +0.219 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 41.23% | −0.298 | −0.104 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 44.26% | −0.228 | −0.057 | |||||
| ND3NADH dehydrogenase subunit 3 | 350 bp | 38.57% | −0.215 | −0.144 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 42.09% | −0.248 | −0.105 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,382 bp | 38.50% | −0.214 | −0.035 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,836 bp | 38.07% | −0.276 | +0.024 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 42.53% | −0.360 | +0.393 | |||||
| CYTBCytochrome b | 1,141 bp | 41.28% | −0.265 | −0.033 | |||||
| 12S rRNA12S ribosomal RNA | 958 bp | 48.64% | −0.069 | +0.220 | |||||
| 16S rRNA16S ribosomal RNA | 1,682 bp | 41.62% | −0.043 | +0.255 | |||||
| D-loopControl region (D-loop) | 931 bp | 33.73% | −0.248 | +0.018 |
Codon usage
Counts per codon, darker is more frequent3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU152
UUC79
Leu L16.1%
UUA163
UUG33
CUU130
CUC56
CUA200
CUG29
Ile I7.5%
AUU230
AUC56
Met M4.9%
AUA138
AUG49
Val V6.0%
GUU72
GUC28
GUA93
GUG34
Ser S6.3%
UCU67
UCC36
UCA76
UCG6
AGU27
AGC29
Pro P5.6%
CCU48
CCC74
CCA83
CCG9
Thr T7.7%
ACU54
ACC80
ACA137
ACG22
Ala A9.0%
GCU69
GCC123
GCA134
GCG18
Tyr Y3.0%
UAU74
UAC39
His H2.6%
CAU33
CAC67
Gln Q2.6%
CAA83
CAG15
Asn N3.2%
AAU68
AAC53
Lys K2.2%
AAA78
AAG5
Asp D2.1%
GAU30
GAC50
Glu E2.7%
GAA80
GAG22
Cys C0.7%
UGU15
UGC11
Trp W3.2%
UGA104
UGG17
Arg R2.0%
CGU5
CGC15
CGA47
CGG10
Gly G6.4%
GGU44
GGC61
GGA99
GGG39
Stop 0.2%
UAA5
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_015614.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (41.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,027 | 958 bp | + | 48.6% |
| tRNA-Val | Transfer RNA | 1,028 | 1,099 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,100 | 2,781 | 1,682 bp | + | 41.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,782 | 2,857 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,859 | 3,833 | 975 bp | + | 40.4% |
| tRNA-Ile | Transfer RNA | 3,838 | 3,909 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,908 | 3,978 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,980 | 4,048 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,049 | 5,094 | 1,046 bp | + | 42.6% |
| tRNA-Trp | Transfer RNA | 5,095 | 5,165 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,167 | 5,235 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,237 | 5,309 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,342 | 5,409 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,411 | 5,481 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,483 | 7,033 | 1,551 bp | + | 41.5% |
| tRNA-Ser (UCN) | Transfer RNA | 7,034 | 7,104 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,107 | 7,178 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,193 | 7,883 | 691 bp | + | 39.1% |
| tRNA-Lys | Transfer RNA | 7,884 | 7,959 | 76 bp | + | – |
| ATP8 | Protein-coding gene | 7,961 | 8,125 | 165 bp | + | 36.4% |
| ATP6 | Protein-coding gene | 8,119 | 8,802 | 684 bp | + | 41.2% |
| COX3 | Protein-coding gene | 8,802 | 9,585 | 784 bp | + | 44.3% |
| tRNA-Gly | Transfer RNA | 9,586 | 9,656 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,657 | 10,006 | 350 bp | + | 38.6% |
| tRNA-Arg | Transfer RNA | 10,007 | 10,076 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,077 | 10,373 | 297 bp | + | 42.1% |
| ND4 | Protein-coding gene | 10,367 | 11,748 | 1,382 bp | + | 38.5% |
| tRNA-His | Transfer RNA | 11,749 | 11,817 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,818 | 11,887 | 70 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,888 | 11,960 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,961 | 13,796 | 1,836 bp | + | 38.1% |
| ND6 | Protein-coding gene | 13,793 | 14,314 | 522 bp | − | 42.5% |
| tRNA-Glu | Transfer RNA | 14,315 | 14,383 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,388 | 15,528 | 1,141 bp | + | 41.3% |
| tRNA-Thr | Transfer RNA | 15,529 | 15,600 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,600 | 15,669 | 70 bp | − | – |
| D-loop | Control region | 15,670 | 16,600 | 931 bp | – | 33.7% |