Pteraclis aesticola
Pacific fanfish
GC content
43.92%
Whole genome
Non-coding
1,205 bp
D-loop 1,144 bp
Where Pacific fanfish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Pacific fanfish has the 1,614th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,809 bp
- GC skew (G − C) / (G + C)
- −0.271
- AT skew (A − T) / (A + T)
- −0.014
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- questionable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,809 bp
Protein-coding11,407 bp
12S rRNA955 bp
16S rRNA1,692 bp
All tRNA1,550 bp
D-loop1,144 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 47.08% | −0.338 | −0.066 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 46.08% | −0.407 | −0.050 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 43.91% | −0.207 | −0.085 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 43.56% | −0.296 | −0.015 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 44.64% | −0.493 | +0.097 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 42.90% | −0.413 | −0.133 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 43.69% | −0.248 | −0.100 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 45.27% | −0.380 | −0.162 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 46.47% | −0.406 | −0.157 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 43.59% | −0.349 | −0.060 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 43.39% | −0.351 | −0.068 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 44.25% | −0.411 | +0.368 | |||||
| CYTBCytochrome b | 1,141 bp | 44.17% | −0.317 | −0.149 | |||||
| 12S rRNA12S ribosomal RNA | 955 bp | 48.59% | −0.112 | +0.141 | |||||
| 16S rRNA16S ribosomal RNA | 1,692 bp | 44.39% | −0.097 | +0.192 | |||||
| D-loopControl region (D-loop) | 1,144 bp | 33.48% | −0.227 | −0.127 |
Codon usage
Counts per codon, darker is more frequent3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.5%
UUU143
UUC105
Leu L17.3%
UUA112
UUG21
CUU215
CUC139
CUA133
CUG39
Ile I7.2%
AUU161
AUC113
Met M4.3%
AUA110
AUG53
Val V5.5%
GUU75
GUC55
GUA67
GUG11
Ser S6.5%
UCU54
UCC69
UCA71
UCG8
AGU8
AGC39
Pro P5.9%
CCU83
CCC66
CCA69
CCG7
Thr T7.8%
ACU61
ACC113
ACA105
ACG17
Ala A8.9%
GCU81
GCC131
GCA115
GCG10
Tyr Y2.8%
UAU39
UAC66
His H2.7%
CAU39
CAC64
Gln Q2.5%
CAA69
CAG25
Asn N3.1%
AAU37
AAC80
Lys K1.9%
AAA65
AAG9
Asp D1.9%
GAU26
GAC48
Glu E2.7%
GAA76
GAG26
Cys C0.7%
UGU12
UGC16
Trp W3.1%
UGA98
UGG21
Arg R2.0%
CGU10
CGC14
CGA48
CGG4
Gly G6.5%
GGU40
GGC78
GGA87
GGG44
Stop 0.2%
UAA5
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_022487.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (43.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,023 | 955 bp | + | 48.6% |
| tRNA-Val | Transfer RNA | 1,024 | 1,095 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,096 | 2,787 | 1,692 bp | + | 44.4% |
| tRNA-Leu (UUR) | Transfer RNA | 2,788 | 2,861 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,862 | 3,836 | 975 bp | + | 47.1% |
| tRNA-Ile | Transfer RNA | 3,841 | 3,911 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,911 | 3,981 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,981 | 4,049 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,050 | 5,095 | 1,046 bp | + | 46.1% |
| tRNA-Trp | Transfer RNA | 5,096 | 5,165 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,167 | 5,235 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,237 | 5,309 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,345 | 5,411 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,412 | 5,478 | 67 bp | − | – |
| COX1 | Protein-coding gene | 5,480 | 7,030 | 1,551 bp | + | 43.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,031 | 7,102 | 72 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,106 | 7,178 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,187 | 7,877 | 691 bp | + | 43.6% |
| tRNA-Lys | Transfer RNA | 7,878 | 7,951 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,953 | 8,120 | 168 bp | + | 44.6% |
| ATP6 | Protein-coding gene | 8,111 | 8,793 | 683 bp | + | 42.9% |
| COX3 | Protein-coding gene | 8,794 | 9,578 | 785 bp | + | 43.7% |
| tRNA-Gly | Transfer RNA | 9,579 | 9,650 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,651 | 9,999 | 349 bp | + | 45.3% |
| tRNA-Arg | Transfer RNA | 10,000 | 10,068 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,069 | 10,365 | 297 bp | + | 46.5% |
| ND4 | Protein-coding gene | 10,359 | 11,739 | 1,381 bp | + | 43.6% |
| tRNA-His | Transfer RNA | 11,740 | 11,809 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,810 | 11,877 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,882 | 11,954 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,955 | 13,793 | 1,839 bp | + | 43.4% |
| ND6 | Protein-coding gene | 13,790 | 14,311 | 522 bp | − | 44.3% |
| tRNA-Glu | Transfer RNA | 14,312 | 14,380 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,385 | 15,525 | 1,141 bp | + | 44.2% |
| tRNA-Thr | Transfer RNA | 15,526 | 15,597 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,597 | 15,666 | 70 bp | − | – |
| D-loop | Control region | 15,666 | 16,809 | 1,144 bp | – | 33.5% |