Pterois volitans
Red firefish
GC content
46.87%
Whole genome
Non-coding
889 bp
Including the D-loop
Where Red firefish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Red firefish has the 1,562nd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,500 bp
- GC skew (G − C) / (G + C)
- −0.231
- AT skew (A − T) / (A + T)
- +0.037
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Updated in build 2
- In the database since
- build 1 (2015-07-01)
- Last changed
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,500 bp
Protein-coding11,407 bp
12S rRNA946 bp
16S rRNA1,704 bp
All tRNA1,554 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 48.00% | −0.269 | −0.085 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 50.77% | −0.360 | +0.014 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 44.87% | −0.129 | −0.095 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.57% | −0.214 | −0.013 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 47.02% | −0.443 | +0.146 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 45.18% | −0.340 | −0.003 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.54% | −0.244 | −0.020 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 50.14% | −0.257 | −0.138 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 52.19% | −0.355 | −0.141 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 47.57% | −0.291 | −0.008 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,837 bp | 46.38% | −0.331 | +0.031 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 49.62% | −0.375 | +0.422 | |||||
| CYTBCytochrome b | 1,141 bp | 50.48% | −0.295 | −0.069 | |||||
| 12S rRNA12S ribosomal RNA | 946 bp | 47.99% | −0.110 | +0.179 | |||||
| 16S rRNA16S ribosomal RNA | 1,704 bp | 46.60% | −0.086 | +0.222 |
Codon usage
Counts per codon, darker is more frequent3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.9%
UUU84
UUC142
Leu L17.4%
UUA79
UUG41
CUU121
CUC126
CUA202
CUG92
Ile I6.8%
AUU141
AUC118
Met M4.0%
AUA87
AUG67
Val V6.1%
GUU47
GUC56
GUA86
GUG42
Ser S6.4%
UCU42
UCC70
UCA62
UCG11
AGU14
AGC45
Pro P5.9%
CCU41
CCC82
CCA86
CCG15
Thr T8.0%
ACU61
ACC126
ACA103
ACG15
Ala A9.2%
GCU58
GCC156
GCA108
GCG28
Tyr Y2.9%
UAU42
UAC69
His H2.8%
CAU25
CAC81
Gln Q2.4%
CAA62
CAG29
Asn N3.0%
AAU45
AAC68
Lys K1.9%
AAA51
AAG23
Asp D2.1%
GAU29
GAC52
Glu E2.6%
GAA65
GAG33
Cys C0.7%
UGU9
UGC17
Trp W3.1%
UGA90
UGG29
Arg R2.1%
CGU14
CGC12
CGA40
CGG14
Gly G6.5%
GGU30
GGC73
GGA75
GGG69
Stop 0.2%
UAA5
UAG1
AGA0
AGG0
Genome map
37 annotated features in NC_025290.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,014 | 946 bp | + | 48.0% |
| tRNA-Val | Transfer RNA | 1,019 | 1,091 | 73 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,092 | 2,795 | 1,704 bp | + | 46.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,796 | 2,869 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,870 | 3,844 | 975 bp | + | 48.0% |
| tRNA-Ile | Transfer RNA | 3,849 | 3,918 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,918 | 3,988 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,988 | 4,056 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,057 | 5,102 | 1,046 bp | + | 50.8% |
| tRNA-Trp | Transfer RNA | 5,103 | 5,173 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,175 | 5,243 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,245 | 5,317 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,354 | 5,420 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,421 | 5,490 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,492 | 7,042 | 1,551 bp | + | 44.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,044 | 7,114 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,119 | 7,191 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,197 | 7,887 | 691 bp | + | 44.6% |
| tRNA-Lys | Transfer RNA | 7,888 | 7,962 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,964 | 8,131 | 168 bp | + | 47.0% |
| ATP6 | Protein-coding gene | 8,122 | 8,805 | 684 bp | + | 45.2% |
| COX3 | Protein-coding gene | 8,805 | 9,589 | 785 bp | + | 48.5% |
| tRNA-Gly | Transfer RNA | 9,590 | 9,661 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,662 | 10,010 | 349 bp | + | 50.1% |
| tRNA-Arg | Transfer RNA | 10,011 | 10,079 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,080 | 10,376 | 297 bp | + | 52.2% |
| ND4 | Protein-coding gene | 10,370 | 11,750 | 1,381 bp | + | 47.6% |
| tRNA-His | Transfer RNA | 11,751 | 11,819 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,819 | 11,888 | 70 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,892 | 11,964 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,965 | 13,801 | 1,837 bp | + | 46.4% |
| ND6 | Protein-coding gene | 13,800 | 14,321 | 522 bp | − | 49.6% |
| tRNA-Glu | Transfer RNA | 14,322 | 14,390 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,397 | 15,537 | 1,141 bp | + | 50.5% |
| tRNA-Thr | Transfer RNA | 15,538 | 15,609 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,609 | 15,678 | 70 bp | − | – |