MitoAge

Rexea solandri

Silver gemfish

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Maximum lifespan
16 yr
AnAge record
mtDNA size
16,350 bp
RefSeq NC_023952.1
GC content
45.76%
Whole genome
Non-coding
749 bp
D-loop 690 bp

Where Silver gemfish sits among 2,335 species

Whole-genome GC content against maximum lifespan. Silver gemfish has the 1,149th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Silver gemfish
  • This species
  • Other ray-finned fishes
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,350 bp
GC skew (G − C) / (G + C)
−0.266
AT skew (A − T) / (A + T)
+0.053

Life history

Maximum lifespan
16 years
Adult weight
8.8 kg
Female sexual maturity
5 years
Male sexual maturity
4 years

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 04167)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,350 bp
Protein-coding11,406 bp
12S rRNA954 bp
16S rRNA1,688 bp
All tRNA1,553 bp
D-loop690 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1975 bp25.4%26.9%15.6%32.1%47.69%−0.346−0.027
ND2NADH dehydrogenase subunit 21,046 bp26.3%25.4%13.6%34.7%48.28%−0.438+0.017
COX1Cytochrome c oxidase subunit I1,551 bp24.6%28.7%18.8%27.9%46.68%−0.193−0.076
COX2Cytochrome c oxidase subunit II691 bp28.5%26.5%15.9%29.1%45.01%−0.293+0.037
ATP8ATP synthase F0 subunit 8168 bp32.7%20.8%13.7%32.7%46.43%−0.410+0.222
ATP6ATP synthase F0 subunit 6684 bp26.3%27.5%14.2%32.0%46.20%−0.386−0.022
COX3Cytochrome c oxidase subunit III785 bp25.7%26.0%16.7%31.6%48.28%−0.309−0.005
ND3NADH dehydrogenase subunit 3349 bp22.9%28.9%15.5%32.7%48.14%−0.357−0.116
ND4LNADH dehydrogenase subunit 4L297 bp22.2%26.6%15.8%35.4%51.18%−0.382−0.090
ND4NADH dehydrogenase subunit 41,381 bp28.4%25.8%14.8%31.1%45.84%−0.355+0.048
ND5NADH dehydrogenase subunit 51,839 bp28.3%27.1%14.5%30.2%44.64%−0.352+0.022
ND6NADH dehydrogenase subunit 6576 bp37.0%18.8%12.5%31.8%44.27%−0.435+0.327
CYTBCytochrome b1,141 bp24.8%29.0%15.8%30.4%46.19%−0.317−0.078
12S rRNA12S ribosomal RNA954 bp30.7%21.1%22.0%26.2%48.22%−0.087+0.186
16S rRNA16S ribosomal RNA1,688 bp32.9%21.4%20.9%24.8%45.68%−0.084+0.210
D-loopControl region (D-loop)690 bp36.8%31.6%14.3%17.2%31.59%−0.092+0.076

Codon usage

Counts per codon, darker is more frequent

3,825 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.3%
UUU95
UUC145
Leu L16.8%
UUA60
UUG15
CUU141
CUC129
CUA234
CUG64
Ile I7.0%
AUU137
AUC130
Met M4.6%
AUA112
AUG63
Val V6.0%
GUU69
GUC51
GUA85
GUG26
Ser S6.2%
UCU42
UCC79
UCA55
UCG5
AGU14
AGC44
Pro P5.9%
CCU56
CCC101
CCA53
CCG14
Thr T7.7%
ACU52
ACC102
ACA129
ACG11
Ala A9.2%
GCU62
GCC157
GCA123
GCG11
Tyr Y2.9%
UAU44
UAC66
His H2.7%
CAU30
CAC75
Gln Q2.4%
CAA78
CAG15
Asn N3.1%
AAU37
AAC83
Lys K1.9%
AAA68
AAG6
Asp D1.9%
GAU14
GAC60
Glu E2.8%
GAA77
GAG29
Cys C0.7%
UGU9
UGC17
Trp W3.2%
UGA108
UGG13
Arg R2.0%
CGU9
CGC11
CGA47
CGG11
Gly G6.4%
GGU29
GGC83
GGA75
GGG58
Stop 0.2%
UAA5
UAG1
AGA0
AGG1

Genome map

38 annotated features in NC_023952.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (45.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA27069 bp+–
12S rRNARibosomal RNA711,024954 bp+48.2%
tRNA-ValTransfer RNA1,0251,09773 bp+–
16S rRNARibosomal RNA1,0982,7851,688 bp+45.7%
tRNA-Leu (UUR)Transfer RNA2,7862,86075 bp+–
ND1Protein-coding gene2,8613,835975 bp+47.7%
tRNA-IleTransfer RNA3,8403,91172 bp+–
tRNA-GluTransfer RNA3,9113,98171 bp−–
tRNA-MetTransfer RNA3,9814,04969 bp+–
ND2Protein-coding gene4,0505,0951,046 bp+48.3%
tRNA-TrpTransfer RNA5,0965,16671 bp+–
tRNA-AlaTransfer RNA5,1685,23669 bp−–
tRNA-AsnTransfer RNA5,2395,31072 bp−–
tRNA-CysTransfer RNA5,3435,40967 bp−–
tRNA-TyrTransfer RNA5,4105,47667 bp−–
COX1Protein-coding gene5,4787,0281,551 bp+46.7%
tRNA-Ser (UCN)Transfer RNA7,0297,09971 bp−–
tRNA-AspTransfer RNA7,1037,17472 bp+–
COX2Protein-coding gene7,1817,871691 bp+45.0%
tRNA-LysTransfer RNA7,8727,94675 bp+–
ATP8Protein-coding gene7,9488,115168 bp+46.4%
ATP6Protein-coding gene8,1068,789684 bp+46.2%
COX3Protein-coding gene8,7899,573785 bp+48.3%
tRNA-GlyTransfer RNA9,5749,64572 bp+–
ND3Protein-coding gene9,6469,994349 bp+48.1%
tRNA-ArgTransfer RNA9,99510,06369 bp+–
ND4LProtein-coding gene10,06410,360297 bp+51.2%
ND4Protein-coding gene10,35411,7341,381 bp+45.8%
tRNA-HisTransfer RNA11,73511,80470 bp+–
tRNA-Ser (AGY)Transfer RNA11,80511,87268 bp+–
tRNA-Leu (CUN)Transfer RNA11,87711,94973 bp+–
ND5Protein-coding gene11,95013,7881,839 bp+44.6%
ND6Protein-coding gene13,73014,305576 bp−44.3%
tRNA-GlnTransfer RNA14,30614,37469 bp−–
CYTBProtein-coding gene14,37915,5191,141 bp+46.2%
tRNA-ThrTransfer RNA15,52015,59071 bp+–
tRNA-ProTransfer RNA15,59015,66071 bp−–
D-loopControl region15,66116,350690 bp–31.6%

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