Rhabdosargus sarba
Goldlined seabream
GC content
46.97%
Whole genome
Non-coding
1,040 bp
D-loop 978 bp
Where Goldlined seabream sits among 2,335 species
Whole-genome GC content against maximum lifespan. Goldlined seabream has the 2,023rd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,644 bp
- GC skew (G − C) / (G + C)
- −0.235
- AT skew (A − T) / (A + T)
- −0.019
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,644 bp
Protein-coding11,425 bp
12S rRNA949 bp
16S rRNA1,693 bp
All tRNA1,553 bp
D-loop978 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 50.05% | −0.279 | −0.183 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,050 bp | 52.67% | −0.356 | −0.082 | |||||
| COX1Cytochrome c oxidase subunit I | 1,566 bp | 45.40% | −0.165 | −0.116 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.86% | −0.206 | −0.003 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 44.24% | −0.425 | +0.022 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 44.88% | −0.401 | −0.162 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 47.39% | −0.280 | −0.041 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 51.29% | −0.318 | −0.353 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.51% | −0.360 | −0.252 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 48.66% | −0.292 | −0.080 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,842 bp | 45.77% | −0.336 | −0.033 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 44.83% | −0.325 | +0.326 | |||||
| CYTBCytochrome b | 1,141 bp | 47.50% | −0.277 | −0.142 | |||||
| 12S rRNA12S ribosomal RNA | 949 bp | 49.21% | −0.075 | +0.178 | |||||
| 16S rRNA16S ribosomal RNA | 1,693 bp | 46.96% | −0.079 | +0.198 | |||||
| D-loopControl region (D-loop) | 978 bp | 39.78% | −0.167 | −0.012 |
Codon usage
Counts per codon, darker is more frequent3,814 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU124
UUC115
Leu L17.4%
UUA80
UUG29
CUU180
CUC176
CUA124
CUG74
Ile I6.7%
AUU154
AUC101
Met M4.0%
AUA81
AUG71
Val V6.2%
GUU92
GUC69
GUA56
GUG19
Ser S6.7%
UCU65
UCC66
UCA62
UCG6
AGU16
AGC42
Pro P5.6%
CCU42
CCC95
CCA62
CCG16
Thr T7.3%
ACU50
ACC115
ACA95
ACG17
Ala A9.4%
GCU71
GCC166
GCA91
GCG29
Tyr Y3.0%
UAU47
UAC66
His H2.8%
CAU33
CAC74
Gln Q2.5%
CAA63
CAG32
Asn N3.0%
AAU42
AAC74
Lys K2.1%
AAA57
AAG22
Asp D2.0%
GAU21
GAC54
Glu E2.6%
GAA70
GAG31
Cys C0.7%
UGU5
UGC21
Trp W3.1%
UGA90
UGG29
Arg R2.1%
CGU10
CGC18
CGA35
CGG16
Gly G6.4%
GGU30
GGC85
GGA67
GGG63
Stop 0.2%
UAA5
UAG1
AGA1
AGG1
Genome map
38 annotated features in NC_025301.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,017 | 949 bp | + | 49.2% |
| tRNA-Val | Transfer RNA | 1,018 | 1,089 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,090 | 2,782 | 1,693 bp | + | 47.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,783 | 2,855 | 73 bp | + | – |
| ND1 | Protein-coding gene | 2,856 | 3,830 | 975 bp | + | 50.1% |
| tRNA-Ile | Transfer RNA | 3,836 | 3,905 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,905 | 3,975 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,975 | 4,043 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,044 | 5,093 | 1,050 bp | + | 52.7% |
| tRNA-Trp | Transfer RNA | 5,091 | 5,160 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,161 | 5,229 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,231 | 5,303 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,338 | 5,403 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,404 | 5,473 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,475 | 7,040 | 1,566 bp | + | 45.4% |
| tRNA-Ser (UCN) | Transfer RNA | 7,028 | 7,098 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,102 | 7,174 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,183 | 7,873 | 691 bp | + | 44.9% |
| tRNA-Lys | Transfer RNA | 7,874 | 7,948 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,950 | 8,114 | 165 bp | + | 44.2% |
| ATP6 | Protein-coding gene | 8,108 | 8,791 | 684 bp | + | 44.9% |
| COX3 | Protein-coding gene | 8,791 | 9,575 | 785 bp | + | 47.4% |
| tRNA-Gly | Transfer RNA | 9,576 | 9,647 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,648 | 9,996 | 349 bp | + | 51.3% |
| tRNA-Arg | Transfer RNA | 9,997 | 10,068 | 72 bp | + | – |
| ND4L | Protein-coding gene | 10,069 | 10,365 | 297 bp | + | 50.5% |
| ND4 | Protein-coding gene | 10,359 | 11,739 | 1,381 bp | + | 48.7% |
| tRNA-His | Transfer RNA | 11,740 | 11,808 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,809 | 11,876 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,882 | 11,954 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,955 | 13,796 | 1,842 bp | + | 45.8% |
| ND6 | Protein-coding gene | 13,789 | 14,310 | 522 bp | − | 44.8% |
| tRNA-Glu | Transfer RNA | 14,311 | 14,379 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,384 | 15,524 | 1,141 bp | + | 47.5% |
| tRNA-Thr | Transfer RNA | 15,525 | 15,596 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,596 | 15,666 | 71 bp | − | – |
| D-loop | Control region | 15,667 | 16,644 | 978 bp | – | 39.8% |