Rhomboplites aurorubens
Vermilion snapper
GC content
47.37%
Whole genome
Non-coding
894 bp
Including the D-loop
Where Vermilion snapper sits among 2,335 species
Whole-genome GC content against maximum lifespan. Vermilion snapper has the 1,579th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,506 bp
- GC skew (G − C) / (G + C)
- −0.304
- AT skew (A − T) / (A + T)
- +0.046
Life history
- Maximum lifespan
- 10 years
- Adult weight
- 1.7 kg
- Female sexual maturity
- 3 years
- Male sexual maturity
- 3 years
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 04239)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,506 bp
Protein-coding11,407 bp
12S rRNA955 bp
16S rRNA1,699 bp
All tRNA1,551 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 48.92% | −0.388 | −0.044 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 50.10% | −0.523 | +0.065 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.58% | −0.179 | −0.090 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 42.98% | −0.273 | −0.015 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 47.62% | −0.550 | +0.091 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 47.81% | −0.388 | −0.087 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.05% | −0.304 | −0.035 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 51.29% | −0.419 | −0.224 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 51.85% | −0.442 | −0.077 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 50.11% | −0.405 | +0.010 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 46.60% | −0.405 | +0.031 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 46.94% | −0.429 | +0.466 | |||||
| CYTBCytochrome b | 1,141 bp | 47.42% | −0.386 | −0.060 | |||||
| 12S rRNA12S ribosomal RNA | 955 bp | 48.90% | −0.105 | +0.205 | |||||
| 16S rRNA16S ribosomal RNA | 1,699 bp | 48.26% | −0.146 | +0.233 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU93
UUC141
Leu L17.7%
UUA74
UUG15
CUU152
CUC183
CUA195
CUG56
Ile I7.0%
AUU131
AUC134
Met M4.1%
AUA92
AUG65
Val V5.6%
GUU62
GUC72
GUA60
GUG20
Ser S6.3%
UCU39
UCC92
UCA46
UCG11
AGU8
AGC45
Pro P5.9%
CCU54
CCC117
CCA40
CCG12
Thr T8.0%
ACU43
ACC127
ACA118
ACG18
Ala A9.0%
GCU64
GCC166
GCA94
GCG17
Tyr Y2.9%
UAU38
UAC73
His H2.8%
CAU25
CAC80
Gln Q2.6%
CAA81
CAG18
Asn N3.1%
AAU23
AAC96
Lys K2.0%
AAA63
AAG12
Asp D1.9%
GAU16
GAC56
Glu E2.6%
GAA79
GAG21
Cys C0.6%
UGU4
UGC20
Trp W3.2%
UGA99
UGG21
Arg R2.0%
CGU8
CGC23
CGA38
CGG6
Gly G6.4%
GGU23
GGC94
GGA76
GGG51
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
37 annotated features in NC_082561.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,023 | 955 bp | + | 48.9% |
| tRNA-Val | Transfer RNA | 1,024 | 1,095 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,096 | 2,794 | 1,699 bp | + | 48.3% |
| tRNA-Leu (UUR) | Transfer RNA | 2,795 | 2,868 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,869 | 3,843 | 975 bp | + | 48.9% |
| tRNA-Ile | Transfer RNA | 3,847 | 3,915 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,915 | 3,985 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,985 | 4,053 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,054 | 5,099 | 1,046 bp | + | 50.1% |
| tRNA-Trp | Transfer RNA | 5,100 | 5,171 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,172 | 5,240 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,242 | 5,314 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,356 | 5,422 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,423 | 5,492 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,494 | 7,044 | 1,551 bp | + | 47.6% |
| tRNA-Ser (UCN) | Transfer RNA | 7,047 | 7,117 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,121 | 7,192 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,199 | 7,889 | 691 bp | + | 43.0% |
| tRNA-Lys | Transfer RNA | 7,890 | 7,964 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,966 | 8,133 | 168 bp | + | 47.6% |
| ATP6 | Protein-coding gene | 8,124 | 8,807 | 684 bp | + | 47.8% |
| COX3 | Protein-coding gene | 8,807 | 9,591 | 785 bp | + | 49.1% |
| tRNA-Gly | Transfer RNA | 9,592 | 9,663 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,664 | 10,012 | 349 bp | + | 51.3% |
| tRNA-Arg | Transfer RNA | 10,013 | 10,081 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,082 | 10,378 | 297 bp | + | 51.9% |
| ND4 | Protein-coding gene | 10,372 | 11,752 | 1,381 bp | + | 50.1% |
| tRNA-His | Transfer RNA | 11,753 | 11,821 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,822 | 11,889 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,894 | 11,966 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,967 | 13,805 | 1,839 bp | + | 46.6% |
| ND6 | Protein-coding gene | 13,802 | 14,323 | 522 bp | − | 46.9% |
| tRNA-Glu | Transfer RNA | 14,324 | 14,392 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,399 | 15,539 | 1,141 bp | + | 47.4% |
| tRNA-Thr | Transfer RNA | 15,540 | 15,611 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,611 | 15,680 | 70 bp | − | – |