MitoAge

Saguinus bicolor

Brazilian bare-faced tamarin

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Maximum lifespan
19 yr
AnAge record
mtDNA size
16,493 bp
RefSeq NC_064176.1
GC content
40.60%
Whole genome
Non-coding
1,138 bp
D-loop 1,064 bp

Where Brazilian bare-faced tamarin sits among 2,335 species

Whole-genome GC content against maximum lifespan. Brazilian bare-faced tamarin has the 992nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Brazilian bare-faced tamarin
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,493 bp
GC skew (G − C) / (G + C)
−0.320
AT skew (A − T) / (A + T)
+0.089

Life history

Maximum lifespan
19 years
Adult weight
495.8 g
Gestation or incubation
160 days
Litter or clutch size
1.6

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02694)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,493 bp
Protein-coding11,352 bp
12S rRNA953 bp
16S rRNA1,558 bp
All tRNA1,504 bp
D-loop1,064 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp32.0%26.3%12.0%29.6%41.68%−0.422+0.099
ND2NADH dehydrogenase subunit 21,036 bp34.8%25.9%8.4%30.9%39.29%−0.572+0.148
COX1Cytochrome c oxidase subunit I1,557 bp27.6%30.4%16.6%25.5%42.07%−0.212−0.049
COX2Cytochrome c oxidase subunit II688 bp32.7%27.0%13.1%27.2%40.26%−0.350+0.095
ATP8ATP synthase F0 subunit 8207 bp41.1%29.0%6.3%23.7%29.95%−0.581+0.172
ATP6ATP synthase F0 subunit 6681 bp31.1%29.1%10.6%29.2%39.79%−0.469+0.034
COX3Cytochrome c oxidase subunit III784 bp27.3%27.7%15.3%29.7%45.03%−0.320−0.007
ND3NADH dehydrogenase subunit 3346 bp29.5%29.2%13.6%27.7%41.33%−0.343+0.005
ND4LNADH dehydrogenase subunit 4L297 bp29.6%34.3%14.1%21.9%36.03%−0.215−0.074
ND4NADH dehydrogenase subunit 41,375 bp32.3%27.3%11.9%28.5%40.44%−0.410+0.084
ND5NADH dehydrogenase subunit 51,806 bp32.1%28.6%11.4%28.0%39.37%−0.423+0.058
ND6NADH dehydrogenase subunit 6534 bp41.8%21.7%9.9%26.6%36.52%−0.456+0.316
CYTBCytochrome b1,140 bp29.0%27.3%13.1%30.6%43.68%−0.402+0.031
12S rRNA12S ribosomal RNA953 bp34.1%22.0%19.0%24.9%43.86%−0.134+0.215
16S rRNA16S ribosomal RNA1,558 bp35.0%24.1%16.9%23.9%40.82%−0.170+0.184
D-loopControl region (D-loop)1,064 bp31.2%26.2%16.2%26.4%42.58%−0.241+0.087

Codon usage

Counts per codon, darker is more frequent

3,800 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%
UUU94
UUC139
Leu L15.5%
UUA105
UUG15
CUU76
CUC74
CUA281
CUG39
Ile I8.4%
AUU157
AUC163
Met M6.7%
AUA202
AUG53
Val V4.6%
GUU45
GUC24
GUA84
GUG20
Ser S7.6%
UCU54
UCC57
UCA115
UCG7
AGU18
AGC38
Pro P5.4%
CCU48
CCC66
CCA84
CCG8
Thr T9.1%
ACU78
ACC107
ACA151
ACG11
Ala A6.6%
GCU67
GCC83
GCA92
GCG9
Tyr Y3.8%
UAU41
UAC102
His H2.4%
CAU30
CAC63
Gln Q2.5%
CAA89
CAG5
Asn N4.0%
AAU44
AAC109
Lys K2.4%
AAA79
AAG12
Asp D1.9%
GAU32
GAC39
Glu E2.3%
GAA64
GAG25
Cys C0.6%
UGU6
UGC17
Trp W2.7%
UGA84
UGG19
Arg R1.6%
CGU7
CGC16
CGA35
CGG4
Gly G5.4%
GGU46
GGC70
GGA60
GGG31
Stop 0.2%
UAA4
UAG2
AGA0
AGG1

Genome map

38 annotated features in NC_064176.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (40.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,022953 bp+43.9%
tRNA-ValTransfer RNA1,0231,08967 bp+–
16S rRNARibosomal RNA1,0902,6471,558 bp+40.8%
tRNA-Leu (UUR)Transfer RNA2,6482,72275 bp+–
ND1Protein-coding gene2,7253,679955 bp+41.7%
tRNA-IleTransfer RNA3,6803,74970 bp+–
tRNA-GlnTransfer RNA3,7473,81872 bp−–
tRNA-MetTransfer RNA3,8223,88968 bp+–
ND2Protein-coding gene3,8924,9271,036 bp+39.3%
tRNA-TrpTransfer RNA4,9284,99467 bp+–
tRNA-AlaTransfer RNA5,0045,07269 bp−–
tRNA-AsnTransfer RNA5,0745,14673 bp−–
tRNA-CysTransfer RNA5,1795,24567 bp−–
tRNA-TyrTransfer RNA5,2465,31368 bp−–
COX1Protein-coding gene5,3226,8781,557 bp+42.1%
tRNA-Ser (UCN)Transfer RNA6,8676,93468 bp−–
tRNA-AspTransfer RNA6,9387,00669 bp+–
COX2Protein-coding gene7,0077,694688 bp+40.3%
tRNA-LysTransfer RNA7,6957,76167 bp+–
ATP8Protein-coding gene7,7627,968207 bp+30.0%
ATP6Protein-coding gene7,9238,603681 bp+39.8%
COX3Protein-coding gene8,6039,386784 bp+45.0%
tRNA-GlyTransfer RNA9,3879,45367 bp+–
ND3Protein-coding gene9,4549,799346 bp+41.3%
tRNA-ArgTransfer RNA9,8009,86566 bp+–
ND4LProtein-coding gene9,86710,163297 bp+36.0%
ND4Protein-coding gene10,15711,5311,375 bp+40.4%
tRNA-HisTransfer RNA11,53211,60069 bp+–
tRNA-Ser (AGY)Transfer RNA11,60111,65959 bp+–
tRNA-Leu (CUN)Transfer RNA11,66011,73071 bp+–
ND5Protein-coding gene11,73413,5391,806 bp+39.4%
ND6Protein-coding gene13,54314,076534 bp−36.5%
tRNA-GluTransfer RNA14,07714,14569 bp−–
CYTBProtein-coding gene14,15015,2891,140 bp+43.7%
tRNA-ThrTransfer RNA15,29215,35968 bp+–
tRNA-ProTransfer RNA15,36115,42969 bp−–
D-loopControl region15,43016,4931,064 bp–42.6%

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