MitoAge

Sander canadensis

Sauger

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Maximum lifespan
18 yr
AnAge record
mtDNA size
16,542 bp
RefSeq NC_021444.1
GC content
44.95%
Whole genome
Non-coding
959 bp
D-loop 892 bp

Where Sauger sits among 2,335 species

Whole-genome GC content against maximum lifespan. Sauger has the 1,032nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Sauger
  • This species
  • Other ray-finned fishes
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,542 bp
GC skew (G − C) / (G + C)
−0.244
AT skew (A − T) / (A + T)
−0.007

Life history

Maximum lifespan
18 years
Adult weight
2 kg
Female sexual maturity
2 years
Male sexual maturity
2 years
Gestation or incubation
20 days

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 04314)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,542 bp
Protein-coding11,413 bp
12S rRNA946 bp
16S rRNA1,688 bp
All tRNA1,546 bp
D-loop892 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1975 bp23.7%31.3%15.9%29.1%45.03%−0.294−0.138
ND2NADH dehydrogenase subunit 21,046 bp26.4%28.9%12.6%32.1%44.74%−0.436−0.045
COX1Cytochrome c oxidase subunit I1,560 bp23.7%31.4%18.7%26.3%44.94%−0.170−0.141
COX2Cytochrome c oxidase subunit II691 bp27.1%30.0%16.9%26.0%42.98%−0.212−0.051
ATP8ATP synthase F0 subunit 8164 bp28.7%25.6%12.8%32.9%45.73%−0.440+0.056
ATP6ATP synthase F0 subunit 6681 bp23.3%30.8%13.4%32.5%45.82%−0.417−0.138
COX3Cytochrome c oxidase subunit III785 bp22.5%29.8%18.5%29.2%47.64%−0.225−0.139
ND3NADH dehydrogenase subunit 3351 bp23.1%31.9%15.4%29.6%45.01%−0.316−0.161
ND4LNADH dehydrogenase subunit 4L295 bp21.4%30.2%15.9%32.5%48.48%−0.343−0.171
ND4NADH dehydrogenase subunit 41,381 bp26.1%28.8%16.0%29.0%45.04%−0.289−0.049
ND5NADH dehydrogenase subunit 51,833 bp27.3%29.5%14.2%29.0%43.21%−0.341−0.039
ND6NADH dehydrogenase subunit 6522 bp38.1%17.4%14.2%30.3%44.44%−0.362+0.372
CYTBCytochrome b1,141 bp23.2%30.6%16.0%30.2%46.19%−0.309−0.137
12S rRNA12S ribosomal RNA946 bp31.0%20.8%22.0%26.2%48.20%−0.088+0.196
16S rRNA16S ribosomal RNA1,688 bp32.3%21.5%20.6%25.6%46.21%−0.108+0.200
D-loopControl region (D-loop)892 bp31.4%31.7%16.0%20.9%36.88%−0.131−0.005

Codon usage

Counts per codon, darker is more frequent

3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%
UUU119
UUC113
Leu L17.3%
UUA122
UUG11
CUU200
CUC111
CUA179
CUG34
Ile I7.1%
AUU191
AUC78
Met M4.0%
AUA107
AUG47
Val V5.7%
GUU72
GUC52
GUA67
GUG26
Ser S6.4%
UCU53
UCC73
UCA52
UCG9
AGU19
AGC36
Pro P6.0%
CCU82
CCC91
CCA54
CCG2
Thr T7.6%
ACU60
ACC116
ACA98
ACG14
Ala A9.4%
GCU69
GCC158
GCA122
GCG8
Tyr Y3.0%
UAU56
UAC58
His H2.9%
CAU40
CAC72
Gln Q2.5%
CAA84
CAG12
Asn N3.0%
AAU54
AAC62
Lys K1.9%
AAA71
AAG3
Asp D2.0%
GAU28
GAC49
Glu E2.6%
GAA70
GAG30
Cys C0.6%
UGU5
UGC19
Trp W3.2%
UGA5
UGG116
Arg R1.9%
CGU16
CGC12
CGA40
CGG6
Gly G6.5%
GGU61
GGC69
GGA77
GGG39
Stop 0.2%
UAA5
UAG1
AGA0
AGG0

Genome map

38 annotated features in NC_021444.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (45.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,014946 bp+48.2%
tRNA-ValTransfer RNA1,0151,08672 bp+–
16S rRNARibosomal RNA1,0882,7751,688 bp+46.2%
tRNA-Leu (UUR)Transfer RNA2,7762,84974 bp+–
ND1Protein-coding gene2,8503,824975 bp+45.0%
tRNA-IleTransfer RNA3,8293,89870 bp+–
tRNA-GlnTransfer RNA3,8983,96972 bp−–
tRNA-MetTransfer RNA3,9694,03769 bp+–
ND2Protein-coding gene4,0385,0831,046 bp+44.7%
tRNA-TrpTransfer RNA5,0845,15471 bp+–
tRNA-AlaTransfer RNA5,1565,22469 bp−–
tRNA-AsnTransfer RNA5,2265,29873 bp−–
tRNA-CysTransfer RNA5,3345,39966 bp−–
tRNA-TyrTransfer RNA5,4005,47071 bp−–
COX1Protein-coding gene5,4637,0221,560 bp+44.9%
tRNA-Ser (UCN)Transfer RNA7,0237,09371 bp−–
tRNA-AspTransfer RNA7,0977,16872 bp+–
COX2Protein-coding gene7,1777,867691 bp+43.0%
tRNA-LysTransfer RNA7,8687,94174 bp+–
ATP8Protein-coding gene7,9438,106164 bp+45.7%
ATP6Protein-coding gene8,1018,781681 bp+45.8%
COX3Protein-coding gene8,7819,565785 bp+47.6%
tRNA-GlyTransfer RNA9,5669,63671 bp+–
ND3Protein-coding gene9,6379,987351 bp+45.0%
tRNA-ArgTransfer RNA9,98810,05669 bp+–
ND4LProtein-coding gene10,05510,349295 bp+48.5%
ND4Protein-coding gene10,34511,7251,381 bp+45.0%
tRNA-HisTransfer RNA11,72611,79469 bp+–
tRNA-Ser (AGY)Transfer RNA11,79511,86268 bp+–
tRNA-Leu (CUN)Transfer RNA11,86911,94173 bp+–
ND5Protein-coding gene11,94213,7741,833 bp+43.2%
ND6Protein-coding gene13,77714,298522 bp−44.4%
tRNA-GluTransfer RNA14,29914,36769 bp−–
CYTBProtein-coding gene14,37315,5131,141 bp+46.2%
tRNA-ThrTransfer RNA15,51415,58572 bp+–
tRNA-ProTransfer RNA15,58515,65066 bp−–
D-loopControl region15,65116,542892 bp–36.9%

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