Sander vitreus
Walleye
GC content
44.77%
Whole genome
Non-coding
1,256 bp
D-loop 1,187 bp
Where Walleye sits among 2,335 species
Whole-genome GC content against maximum lifespan. Walleye has the 492nd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,858 bp
- GC skew (G − C) / (G + C)
- −0.237
- AT skew (A − T) / (A + T)
- −0.007
Life history
- Maximum lifespan
- 29 years
- Adult weight
- 11 kg
- Litter or clutch size
- 150,000
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 04316)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,858 bp
Protein-coding11,411 bp
12S rRNA950 bp
16S rRNA1,697 bp
All tRNA1,548 bp
D-loop1,187 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 44.00% | −0.268 | −0.125 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,047 bp | 46.80% | −0.359 | −0.084 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 45.13% | −0.191 | −0.128 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.86% | −0.252 | −0.018 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 42.26% | −0.352 | +0.155 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 46.49% | −0.384 | −0.169 | |||||
| COX3Cytochrome c oxidase subunit III | 786 bp | 47.46% | −0.276 | −0.061 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 47.01% | −0.285 | −0.247 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.17% | −0.356 | −0.122 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 44.10% | −0.294 | −0.057 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 43.50% | −0.318 | −0.041 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 45.98% | −0.308 | +0.362 | |||||
| CYTBCytochrome b | 1,141 bp | 44.70% | −0.341 | −0.113 | |||||
| 12S rRNA12S ribosomal RNA | 950 bp | 47.90% | −0.073 | +0.180 | |||||
| 16S rRNA16S ribosomal RNA | 1,697 bp | 46.02% | −0.109 | +0.192 | |||||
| D-loopControl region (D-loop) | 1,187 bp | 34.37% | −0.167 | +0.004 |
Codon usage
Counts per codon, darker is more frequent3,810 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU122
UUC114
Leu L17.0%
UUA118
UUG18
CUU185
CUC124
CUA148
CUG55
Ile I6.9%
AUU164
AUC100
Met M4.0%
AUA111
AUG43
Val V6.2%
GUU74
GUC62
GUA77
GUG22
Ser S6.5%
UCU55
UCC75
UCA50
UCG7
AGU20
AGC39
Pro P5.9%
CCU74
CCC99
CCA41
CCG10
Thr T7.6%
ACU69
ACC99
ACA102
ACG18
Ala A9.4%
GCU86
GCC147
GCA112
GCG12
Tyr Y3.0%
UAU54
UAC62
His H2.7%
CAU32
CAC72
Gln Q2.5%
CAA74
CAG20
Asn N3.0%
AAU60
AAC56
Lys K1.9%
AAA66
AAG8
Asp D2.0%
GAU29
GAC47
Glu E2.7%
GAA71
GAG30
Cys C0.6%
UGU10
UGC14
Trp W3.1%
UGA90
UGG29
Arg R2.0%
CGU11
CGC16
CGA37
CGG13
Gly G6.5%
GGU35
GGC82
GGA71
GGG59
Stop 0.3%
UAA7
UAG3
AGA0
AGG0
Genome map
38 annotated features in NC_028285.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,018 | 950 bp | + | 47.9% |
| tRNA-Val | Transfer RNA | 1,019 | 1,090 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,091 | 2,787 | 1,697 bp | + | 46.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,788 | 2,861 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,862 | 3,836 | 975 bp | + | 44.0% |
| tRNA-Ile | Transfer RNA | 3,841 | 3,910 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,909 | 3,981 | 73 bp | − | – |
| tRNA-Met | Transfer RNA | 3,980 | 4,048 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,050 | 5,096 | 1,047 bp | + | 46.8% |
| tRNA-Trp | Transfer RNA | 5,096 | 5,166 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,168 | 5,236 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,239 | 5,311 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,349 | 5,414 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,415 | 5,485 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,487 | 7,037 | 1,551 bp | + | 45.1% |
| tRNA-Ser (UCN) | Transfer RNA | 7,038 | 7,108 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,112 | 7,183 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,192 | 7,882 | 691 bp | + | 44.9% |
| tRNA-Lys | Transfer RNA | 7,883 | 7,956 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,959 | 8,126 | 168 bp | + | 42.3% |
| ATP6 | Protein-coding gene | 8,117 | 8,800 | 684 bp | + | 46.5% |
| COX3 | Protein-coding gene | 8,800 | 9,585 | 786 bp | + | 47.5% |
| tRNA-Gly | Transfer RNA | 9,585 | 9,654 | 70 bp | + | – |
| ND3 | Protein-coding gene | 9,655 | 10,005 | 351 bp | + | 47.0% |
| tRNA-Arg | Transfer RNA | 10,004 | 10,072 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,073 | 10,369 | 297 bp | + | 50.2% |
| ND4 | Protein-coding gene | 10,363 | 11,743 | 1,381 bp | + | 44.1% |
| tRNA-His | Transfer RNA | 11,744 | 11,812 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,813 | 11,880 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,886 | 11,958 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,959 | 13,797 | 1,839 bp | + | 43.5% |
| ND6 | Protein-coding gene | 13,794 | 14,315 | 522 bp | − | 46.0% |
| tRNA-Glu | Transfer RNA | 14,316 | 14,384 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,390 | 15,530 | 1,141 bp | + | 44.7% |
| tRNA-Thr | Transfer RNA | 15,531 | 15,602 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,602 | 15,671 | 70 bp | − | – |
| D-loop | Control region | 15,672 | 16,858 | 1,187 bp | – | 34.4% |