MitoAge

Sarcophilus harrisii

Tasmanian devil

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Maximum lifespan
13 yr
AnAge record
mtDNA size
17,117 bp
RefSeq NC_018788.1
GC content
37.37%
Whole genome
Non-coding
1,784 bp
Including the D-loop

Where Tasmanian devil sits among 2,335 species

Whole-genome GC content against maximum lifespan. Tasmanian devil has the 1,353rd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Tasmanian devil
  • This species
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  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,117 bp
GC skew (G − C) / (G + C)
−0.295
AT skew (A − T) / (A + T)
+0.032

Life history

Maximum lifespan
13 years
Adult weight
6.5 kg
Birth weight
23.5 mg
Basal metabolic rate
8.664 W
Body temperature
35.8 °C
Female sexual maturity
2 years
Male sexual maturity
2 years
Gestation or incubation
26 days
Litter or clutch size
3
Litters per year
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02476)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome17,117 bp
Protein-coding11,324 bp
12S rRNA951 bp
16S rRNA1,568 bp
All tRNA1,492 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp31.7%30.9%10.7%26.8%37.41%−0.430+0.012
ND2NADH dehydrogenase subunit 21,044 bp33.1%28.2%9.6%29.1%38.70%−0.505+0.081
COX1Cytochrome c oxidase subunit I1,542 bp27.5%32.9%16.2%23.3%39.56%−0.180−0.090
COX2Cytochrome c oxidase subunit II682 bp32.6%30.9%13.6%22.9%36.51%−0.253+0.025
ATP8ATP synthase F0 subunit 8209 bp33.0%32.1%10.5%24.4%34.93%−0.397+0.015
ATP6ATP synthase F0 subunit 6681 bp30.5%32.9%9.5%27.0%36.56%−0.478−0.037
COX3Cytochrome c oxidase subunit III784 bp26.7%31.8%15.7%25.9%41.58%−0.245−0.087
ND3NADH dehydrogenase subunit 3346 bp28.6%32.9%11.6%26.9%38.44%−0.399−0.070
ND4LNADH dehydrogenase subunit 4L297 bp30.6%35.7%10.4%23.2%33.67%−0.380−0.076
ND4NADH dehydrogenase subunit 41,378 bp29.8%32.3%10.5%27.4%37.88%−0.444−0.040
ND5NADH dehydrogenase subunit 51,809 bp33.2%30.3%10.6%25.9%36.48%−0.421+0.046
ND6NADH dehydrogenase subunit 6501 bp42.7%20.4%7.6%29.3%36.93%−0.589+0.354
CYTBCytochrome b1,146 bp28.6%30.8%12.2%28.4%40.58%−0.398−0.037
12S rRNA12S ribosomal RNA951 bp35.9%23.6%18.5%22.1%40.59%−0.088+0.207
16S rRNA16S ribosomal RNA1,568 bp36.0%26.5%17.1%20.3%37.44%−0.087+0.152

Codon usage

Counts per codon, darker is more frequent

3,790 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.3%
UUU113
UUC126
Leu L16.3%
UUA154
UUG22
CUU104
CUC87
CUA230
CUG20
Ile I9.5%
AUU211
AUC149
Met M5.9%
AUA191
AUG32
Val V4.5%
GUU43
GUC28
GUA78
GUG21
Ser S7.0%
UCU83
UCC55
UCA76
UCG3
AGU15
AGC32
Pro P5.2%
CCU71
CCC42
CCA83
CCG2
Thr T8.3%
ACU72
ACC98
ACA136
ACG9
Ala A6.5%
GCU93
GCC70
GCA80
GCG5
Tyr Y3.5%
UAU81
UAC51
His H2.6%
CAU42
CAC58
Gln Q2.3%
CAA80
CAG8
Asn N4.0%
AAU72
AAC80
Lys K2.3%
AAA83
AAG4
Asp D1.7%
GAU29
GAC36
Glu E2.5%
GAA82
GAG14
Cys C0.9%
UGU12
UGC23
Trp W2.8%
UGA94
UGG13
Arg R1.7%
CGU5
CGC12
CGA45
CGG3
Gly G5.8%
GGU57
GGC68
GGA81
GGG15
Stop 0.2%
UAA5
UAG2
AGA1
AGG0

Genome map

37 annotated features in NC_018788.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (37.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA56963769 bp+–
12S rRNARibosomal RNA6381,588951 bp+40.6%
tRNA-ValTransfer RNA1,5901,65768 bp+–
16S rRNARibosomal RNA1,6583,2251,568 bp+37.4%
tRNA-Leu (UUR)Transfer RNA3,2273,29973 bp+–
ND1Protein-coding gene3,3014,257957 bp+37.4%
tRNA-IleTransfer RNA4,2574,32468 bp−–
tRNA-GlnTransfer RNA4,3224,39271 bp+–
tRNA-MetTransfer RNA4,3924,45968 bp+–
ND2Protein-coding gene4,4615,5041,044 bp+38.7%
tRNA-AlaTransfer RNA5,5065,57469 bp−–
tRNA-CysTransfer RNA5,5805,64364 bp−–
tRNA-TrpTransfer RNA5,6495,71870 bp+–
tRNA-AsnTransfer RNA5,8005,87172 bp−–
tRNA-TyrTransfer RNA5,8785,94164 bp−–
COX1Protein-coding gene5,9437,4841,542 bp+39.6%
tRNA-Ser (UCN)Transfer RNA7,4907,55869 bp−–
tRNA-AspTransfer RNA7,5627,63170 bp+–
COX2Protein-coding gene7,6348,315682 bp+36.5%
tRNA-LysTransfer RNA8,3168,37762 bp+–
ATP8Protein-coding gene8,3778,585209 bp+34.9%
ATP6Protein-coding gene8,5419,221681 bp+36.6%
COX3Protein-coding gene9,25710,040784 bp+41.6%
tRNA-GlyTransfer RNA10,04110,10868 bp+–
ND3Protein-coding gene10,10910,454346 bp+38.4%
tRNA-ArgTransfer RNA10,45510,52369 bp+–
ND4LProtein-coding gene10,52410,820297 bp+33.7%
ND4Protein-coding gene10,81412,1911,378 bp+37.9%
tRNA-HisTransfer RNA12,19212,26069 bp+–
tRNA-Ser (AGY)Transfer RNA12,26012,31960 bp+–
tRNA-Leu (CUN)Transfer RNA12,32012,39071 bp+–
ND5Protein-coding gene12,39114,1991,809 bp+36.5%
ND6Protein-coding gene14,20014,700501 bp−36.9%
tRNA-GluTransfer RNA14,70414,77168 bp−–
CYTBProtein-coding gene14,77515,9201,146 bp+40.6%
tRNA-ThrTransfer RNA15,92115,98868 bp+–
tRNA-ProTransfer RNA15,99116,05767 bp−–

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