Saurida elongata
Slender lizardfish
GC content
49.08%
Whole genome
Non-coding
980 bp
D-loop 919 bp
Where Slender lizardfish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Slender lizardfish has the 1,843rd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,552 bp
- GC skew (G − C) / (G + C)
- −0.283
- AT skew (A − T) / (A + T)
- +0.009
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,552 bp
Protein-coding11,406 bp
12S rRNA945 bp
16S rRNA1,672 bp
All tRNA1,550 bp
D-loop919 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 50.67% | −0.328 | −0.135 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 50.86% | −0.451 | −0.097 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 49.71% | −0.180 | −0.141 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 46.60% | −0.298 | +0.008 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 51.79% | −0.494 | +0.160 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 47.08% | −0.429 | −0.111 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.68% | −0.292 | −0.104 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 50.72% | −0.333 | −0.221 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 54.88% | −0.411 | −0.104 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 50.18% | −0.351 | −0.081 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 48.29% | −0.408 | +0.007 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 51.92% | −0.410 | +0.434 | |||||
| CYTBCytochrome b | 1,141 bp | 51.18% | −0.329 | −0.102 | |||||
| 12S rRNA12S ribosomal RNA | 945 bp | 49.52% | −0.115 | +0.178 | |||||
| 16S rRNA16S ribosomal RNA | 1,672 bp | 48.09% | −0.127 | +0.230 | |||||
| D-loopControl region (D-loop) | 919 bp | 41.68% | −0.238 | +0.004 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.4%
UUU115
UUC128
Leu L17.4%
UUA37
UUG35
CUU162
CUC206
CUA154
CUG68
Ile I7.0%
AUU137
AUC130
Met M4.0%
AUA77
AUG75
Val V5.9%
GUU72
GUC71
GUA55
GUG27
Ser S6.5%
UCU30
UCC114
UCA33
UCG14
AGU11
AGC44
Pro P5.8%
CCU44
CCC123
CCA36
CCG18
Thr T7.9%
ACU59
ACC149
ACA72
ACG20
Ala A9.0%
GCU61
GCC175
GCA74
GCG31
Tyr Y2.9%
UAU32
UAC77
His H2.7%
CAU14
CAC90
Gln Q2.5%
CAA74
CAG23
Asn N3.1%
AAU30
AAC88
Lys K2.0%
AAA53
AAG24
Asp D2.0%
GAU22
GAC55
Glu E2.7%
GAA79
GAG24
Cys C0.7%
UGU7
UGC18
Trp W3.1%
UGA93
UGG25
Arg R2.0%
CGU4
CGC21
CGA32
CGG19
Gly G6.3%
GGU27
GGC89
GGA51
GGG72
Stop 0.2%
UAA5
UAG1
AGA1
AGG0
Genome map
38 annotated features in NC_025940.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (49.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,013 | 945 bp | + | 49.5% |
| tRNA-Val | Transfer RNA | 1,013 | 1,084 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,085 | 2,756 | 1,672 bp | + | 48.1% |
| tRNA-Leu (UUR) | Transfer RNA | 2,757 | 2,830 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,831 | 3,805 | 975 bp | + | 50.7% |
| tRNA-Ile | Transfer RNA | 3,809 | 3,880 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,880 | 3,950 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,950 | 4,019 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,020 | 5,065 | 1,046 bp | + | 50.9% |
| tRNA-Trp | Transfer RNA | 5,066 | 5,136 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,137 | 5,205 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,207 | 5,279 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,313 | 5,377 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,378 | 5,447 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,449 | 6,999 | 1,551 bp | + | 49.7% |
| tRNA-Ser (UCN) | Transfer RNA | 7,000 | 7,070 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,074 | 7,144 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,158 | 7,848 | 691 bp | + | 46.6% |
| tRNA-Lys | Transfer RNA | 7,849 | 7,920 | 72 bp | + | – |
| ATP8 | Protein-coding gene | 7,922 | 8,089 | 168 bp | + | 51.8% |
| ATP6 | Protein-coding gene | 8,080 | 8,763 | 684 bp | + | 47.1% |
| COX3 | Protein-coding gene | 8,763 | 9,547 | 785 bp | + | 49.7% |
| tRNA-Gly | Transfer RNA | 9,548 | 9,618 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,619 | 9,967 | 349 bp | + | 50.7% |
| tRNA-Arg | Transfer RNA | 9,968 | 10,036 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,037 | 10,333 | 297 bp | + | 54.9% |
| ND4 | Protein-coding gene | 10,327 | 11,707 | 1,381 bp | + | 50.2% |
| tRNA-His | Transfer RNA | 11,708 | 11,778 | 71 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,779 | 11,847 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,849 | 11,921 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,922 | 13,760 | 1,839 bp | + | 48.3% |
| ND6 | Protein-coding gene | 13,756 | 14,277 | 522 bp | − | 51.9% |
| tRNA-Glu | Transfer RNA | 14,279 | 14,347 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,352 | 15,492 | 1,141 bp | + | 51.2% |
| tRNA-Thr | Transfer RNA | 15,493 | 15,564 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,564 | 15,633 | 70 bp | − | – |
| D-loop | Control region | 15,634 | 16,552 | 919 bp | – | 41.7% |