MitoAge

Scomberomorus munroi

Australian spotted mackerel

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Maximum lifespan
7 yr
FishBase record
mtDNA size
16,796 bp
RefSeq NC_021390.1
GC content
46.40%
Whole genome
Non-coding
1,150 bp
D-loop 1,065 bp

Where Australian spotted mackerel sits among 2,335 species

Whole-genome GC content against maximum lifespan. Australian spotted mackerel has the 1,851st longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Australian spotted mackerel
  • This species
  • Other ray-finned fishes
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,796 bp
GC skew (G − C) / (G + C)
−0.304
AT skew (A − T) / (A + T)
+0.054

Life history

Maximum lifespan
7 years

Lifespan from FishBase · FishBase record

About this record

Lifespan source
FishBase v26.06
Based on
an observed animal, origin not stated
Data quality
acceptable
Licence
CC BY-NC 4.0
Status
New in build 2
In the database since
build 2 (2026-11-13)

The lifespan value is for non-commercial use only; the genome data is not restricted by it.

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,796 bp
Protein-coding11,426 bp
12S rRNA968 bp
16S rRNA1,701 bp
All tRNA1,560 bp
D-loop1,065 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1975 bp25.8%26.7%14.6%32.9%47.49%−0.387−0.016
ND2NADH dehydrogenase subunit 21,046 bp27.2%25.0%12.2%35.5%47.71%−0.487+0.042
COX1Cytochrome c oxidase subunit I1,566 bp25.6%27.5%17.4%29.5%46.94%−0.257−0.035
COX2Cytochrome c oxidase subunit II691 bp28.9%26.6%15.3%29.1%44.43%−0.309+0.042
ATP8ATP synthase F0 subunit 8168 bp29.8%20.8%12.5%36.9%49.41%−0.494+0.176
ATP6ATP synthase F0 subunit 6684 bp27.3%28.5%12.4%31.7%44.15%−0.437−0.021
COX3Cytochrome c oxidase subunit III785 bp25.4%27.5%15.8%31.3%47.13%−0.330−0.041
ND3NADH dehydrogenase subunit 3349 bp21.5%27.8%14.9%35.8%50.72%−0.412−0.128
ND4LNADH dehydrogenase subunit 4L297 bp23.6%24.2%13.8%38.4%52.19%−0.471−0.014
ND4NADH dehydrogenase subunit 41,381 bp27.4%26.3%14.1%32.2%46.27%−0.390+0.022
ND5NADH dehydrogenase subunit 51,839 bp28.4%25.8%13.3%32.5%45.79%−0.418+0.049
ND6NADH dehydrogenase subunit 6522 bp37.5%13.0%13.4%36.0%49.43%−0.457+0.485
CYTBCytochrome b1,144 bp25.0%27.3%14.9%32.8%47.73%−0.374−0.043
12S rRNA12S ribosomal RNA968 bp29.5%20.7%21.8%28.0%49.79%−0.124+0.177
16S rRNA16S ribosomal RNA1,701 bp31.7%21.3%21.3%25.7%47.03%−0.095+0.196
D-loopControl region (D-loop)1,065 bp31.3%31.6%15.3%21.8%37.09%−0.175−0.006

Codon usage

Counts per codon, darker is more frequent

3,813 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%
UUU74
UUC158
Leu L17.3%
UUA68
UUG18
CUU136
CUC204
CUA194
CUG41
Ile I7.2%
AUU129
AUC145
Met M4.2%
AUA104
AUG58
Val V5.4%
GUU62
GUC55
GUA62
GUG26
Ser S6.5%
UCU35
UCC83
UCA58
UCG12
AGU9
AGC49
Pro P6.0%
CCU51
CCC95
CCA68
CCG14
Thr T8.1%
ACU50
ACC118
ACA128
ACG11
Ala A9.0%
GCU62
GCC149
GCA118
GCG13
Tyr Y2.9%
UAU47
UAC64
His H2.8%
CAU33
CAC73
Gln Q2.4%
CAA84
CAG9
Asn N3.4%
AAU38
AAC90
Lys K1.9%
AAA67
AAG6
Asp D1.9%
GAU18
GAC55
Glu E2.7%
GAA79
GAG25
Cys C0.7%
UGU5
UGC21
Trp W3.1%
UGA107
UGG10
Arg R2.0%
CGU5
CGC11
CGA52
CGG8
Gly G6.3%
GGU36
GGC92
GGA83
GGG31
Stop 0.2%
UAA4
UAG2
AGA0
AGG1

Genome map

38 annotated features in NC_021390.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (46.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
CYTBProtein-coding gene11,1441,144 bp+47.7%
tRNA-ThrTransfer RNA1,1451,22076 bp+–
tRNA-ProTransfer RNA1,2251,29470 bp−–
D-loopControl region1,2952,3591,065 bp–37.1%
tRNA-PheTransfer RNA2,3602,42869 bp+–
12S rRNARibosomal RNA2,4293,396968 bp+49.8%
tRNA-ValTransfer RNA3,3973,46872 bp+–
16S rRNARibosomal RNA3,4695,1691,701 bp+47.0%
tRNA-Leu (UUR)Transfer RNA5,1705,24374 bp+–
ND1Protein-coding gene5,2446,218975 bp+47.5%
tRNA-IleTransfer RNA6,2236,29371 bp+–
tRNA-GlnTransfer RNA6,2936,36270 bp−–
tRNA-MetTransfer RNA6,3636,43068 bp+–
ND2Protein-coding gene6,4317,4761,046 bp+47.7%
tRNA-TrpTransfer RNA7,4777,54973 bp+–
tRNA-AlaTransfer RNA7,5517,61969 bp−–
tRNA-AsnTransfer RNA7,6217,69373 bp−–
tRNA-CysTransfer RNA7,7277,79367 bp−–
tRNA-TyrTransfer RNA7,7947,86168 bp−–
COX1Protein-coding gene7,8639,4281,566 bp+46.9%
tRNA-Ser (UCN)Transfer RNA9,4209,49172 bp−–
tRNA-AspTransfer RNA9,4969,56974 bp+–
COX2Protein-coding gene9,57810,268691 bp+44.4%
tRNA-LysTransfer RNA10,26910,34375 bp+–
ATP8Protein-coding gene10,34510,512168 bp+49.4%
ATP6Protein-coding gene10,50311,186684 bp+44.2%
COX3Protein-coding gene11,20711,991785 bp+47.1%
tRNA-GlyTransfer RNA11,99212,06372 bp+–
ND3Protein-coding gene12,06412,412349 bp+50.7%
tRNA-ArgTransfer RNA12,41312,48169 bp+–
ND4LProtein-coding gene12,48212,778297 bp+52.2%
ND4Protein-coding gene12,77214,1521,381 bp+46.3%
tRNA-HisTransfer RNA14,15314,22270 bp+–
tRNA-Ser (AGY)Transfer RNA14,22314,28967 bp+–
tRNA-Leu (CUN)Transfer RNA14,29414,36673 bp+–
ND5Protein-coding gene14,36716,2051,839 bp+45.8%
ND6Protein-coding gene16,20216,723522 bp−49.4%
tRNA-GluTransfer RNA16,72416,79269 bp−–

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