Sebastes aleutianus

Rougheye rockfish

Maximum lifespan

205 yr

AnAge record

mtDNA size

16,977 bp

RefSeq NC_039779.1

GC content

45.59%

Whole genome

Non-coding

1,384 bp

D-loop 1,305 bp

Where Rougheye rockfish sits among 2,335 species

Whole-genome GC content against maximum lifespan. Rougheye rockfish has the 6th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,977 bp

GC skew (G − C) / (G + C): −0.235
AT skew (A − T) / (A + T): +0.010

Life history

Maximum lifespan: 205 years
Adult weight: 495 g

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 04502)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: New in build 2
In the database since: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,977 bp

Protein-coding11,407 bp

12S rRNA943 bp

16S rRNA1,693 bp

All tRNA1,551 bp

D-loop1,305 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Sebastes aleutianus genes

ND1NADH dehydrogenase subunit 1	975 bp	22.7%	30.1%	16.4%	30.9%	47.28%	−0.306	−0.140
ND2NADH dehydrogenase subunit 2	1,046 bp	26.2%	26.9%	14.2%	32.7%	46.94%	−0.393	−0.013
COX1Cytochrome c oxidase subunit I	1,551 bp	24.2%	29.8%	18.8%	27.1%	45.97%	−0.181	−0.103
COX2Cytochrome c oxidase subunit II	691 bp	28.8%	28.4%	16.2%	26.6%	42.84%	−0.243	+0.008
ATP8ATP synthase F0 subunit 8	168 bp	28.6%	23.8%	14.3%	33.3%	47.62%	−0.400	+0.091
ATP6ATP synthase F0 subunit 6	684 bp	26.6%	29.8%	13.2%	30.4%	43.57%	−0.396	−0.057
COX3Cytochrome c oxidase subunit III	785 bp	25.2%	28.5%	17.5%	28.8%	46.24%	−0.245	−0.062
ND3NADH dehydrogenase subunit 3	349 bp	20.6%	31.8%	16.3%	31.2%	47.56%	−0.313	−0.213
ND4LNADH dehydrogenase subunit 4L	297 bp	20.9%	31.3%	17.8%	30.0%	47.81%	−0.254	−0.200
ND4NADH dehydrogenase subunit 4	1,381 bp	24.8%	28.3%	16.4%	30.5%	46.85%	−0.301	−0.065
ND5NADH dehydrogenase subunit 5	1,839 bp	26.6%	28.3%	15.3%	29.9%	45.13%	−0.323	−0.031
ND6NADH dehydrogenase subunit 6	522 bp	35.6%	15.3%	16.1%	33.0%	49.04%	−0.344	+0.399
CYTBCytochrome b	1,141 bp	25.1%	30.4%	15.6%	28.9%	44.52%	−0.299	−0.096
12S rRNA12S ribosomal RNA	943 bp	29.9%	19.6%	22.5%	28.0%	50.48%	−0.109	+0.208
16S rRNA16S ribosomal RNA	1,693 bp	32.0%	21.4%	21.4%	25.2%	46.60%	−0.082	+0.197
D-loopControl region (D-loop)	1,305 bp	33.3%	30.8%	15.3%	20.5%	35.89%	−0.145	+0.038

Codon usage

Counts per codon, darker is more frequent

Gene

3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%

UUU120

UUC110

Leu L17.6%

UUA108

UUG33

CUU156

CUC144

CUA175

CUG53

Ile I6.6%

AUU176

AUC77

Met M3.8%

AUA85

AUG58

Val V6.3%

GUU72

GUC53

GUA84

GUG30

Ser S6.3%

UCU46

UCC58

UCA67

UCG11

AGU15

AGC43

Pro P5.8%

CCU52

CCC105

CCA48

CCG15

Thr T7.9%

ACU47

ACC123

ACA108

ACG21

Ala A9.5%

GCU73

GCC157

GCA108

GCG22

Tyr Y3.0%

UAU56

UAC57

His H2.7%

CAU34

CAC70

Gln Q2.5%

CAA80

CAG16

Asn N3.0%

AAU53

AAC61

Lys K1.9%

AAA52

AAG22

Asp D2.1%

GAU28

GAC52

Glu E2.5%

GAA67

GAG29

Cys C0.7%

UGU7

UGC19

Trp W3.1%

UGA106

UGG12

Arg R2.1%

CGU8

CGC21

CGA39

CGG11

Gly G6.5%

GGU48

GGC82

GGA70

GGG47

Stop 0.2%

UAA6

UAG1

AGA0

AGG0

Genome map

38 annotated features in NC_039779.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (45.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Sebastes aleutianus (NC_039779.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	68	68 bp	+	–
12S rRNA	Ribosomal RNA	69	1,011	943 bp	+	50.5%
tRNA-Val	Transfer RNA	1,015	1,086	72 bp	+	–
16S rRNA	Ribosomal RNA	1,087	2,779	1,693 bp	+	46.6%
tRNA-Leu (UUR)	Transfer RNA	2,780	2,853	74 bp	+	–
ND1	Protein-coding gene	2,854	3,828	975 bp	+	47.3%
tRNA-Ile	Transfer RNA	3,833	3,901	69 bp	+	–
tRNA-Gln	Transfer RNA	3,902	3,972	71 bp	−	–
tRNA-Met	Transfer RNA	3,972	4,042	71 bp	+	–
ND2	Protein-coding gene	4,043	5,088	1,046 bp	+	46.9%
tRNA-Trp	Transfer RNA	5,089	5,159	71 bp	+	–
tRNA-Ala	Transfer RNA	5,161	5,229	69 bp	−	–
tRNA-Asn	Transfer RNA	5,232	5,303	72 bp	−	–
tRNA-Cys	Transfer RNA	5,352	5,415	64 bp	+	–
tRNA-Tyr	Transfer RNA	5,416	5,486	71 bp	−	–
COX1	Protein-coding gene	5,488	7,038	1,551 bp	+	46.0%
tRNA-Ser (UCN)	Transfer RNA	7,038	7,109	72 bp	−	–
tRNA-Asp	Transfer RNA	7,113	7,185	73 bp	+	–
COX2	Protein-coding gene	7,192	7,882	691 bp	+	42.8%
tRNA-Lys	Transfer RNA	7,883	7,956	74 bp	+	–
ATP8	Protein-coding gene	7,958	8,125	168 bp	+	47.6%
ATP6	Protein-coding gene	8,116	8,799	684 bp	+	43.6%
COX3	Protein-coding gene	8,799	9,583	785 bp	+	46.2%
tRNA-Gly	Transfer RNA	9,584	9,655	72 bp	+	–
ND3	Protein-coding gene	9,656	10,004	349 bp	+	47.6%
tRNA-Arg	Transfer RNA	10,005	10,073	69 bp	+	–
ND4L	Protein-coding gene	10,074	10,370	297 bp	+	47.8%
ND4	Protein-coding gene	10,364	11,744	1,381 bp	+	46.9%
tRNA-His	Transfer RNA	11,745	11,813	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,814	11,881	68 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,886	11,958	73 bp	+	–
ND5	Protein-coding gene	11,959	13,797	1,839 bp	+	45.1%
ND6	Protein-coding gene	13,794	14,315	522 bp	−	49.0%
tRNA-Glu	Transfer RNA	14,316	14,384	69 bp	−	–
CYTB	Protein-coding gene	14,391	15,531	1,141 bp	+	44.5%
tRNA-Thr	Transfer RNA	15,532	15,603	72 bp	+	–
tRNA-Pro	Transfer RNA	15,603	15,672	70 bp	−	–
D-loop	Control region	15,673	16,977	1,305 bp	–	35.9%