Sebastes caurinus

Copper rockfish

Maximum lifespan

55 yr

AnAge record

mtDNA size

16,772 bp

RefSeq NC_066933.1

GC content

45.64%

Whole genome

Non-coding

1,174 bp

D-loop 953 bp

Where Copper rockfish sits among 2,335 species

Whole-genome GC content against maximum lifespan. Copper rockfish has the 122nd longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,772 bp

GC skew (G − C) / (G + C): −0.249
AT skew (A − T) / (A + T): +0.024

Life history

Maximum lifespan: 55 years
Adult weight: 1.5 kg

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 04510)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: New in build 2
In the database since: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,772 bp

Protein-coding11,408 bp

12S rRNA946 bp

16S rRNA1,692 bp

All tRNA1,552 bp

D-loop953 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Sebastes caurinus genes

ND1NADH dehydrogenase subunit 1	975 bp	22.4%	28.8%	16.8%	32.0%	48.82%	−0.311	−0.126
ND2NADH dehydrogenase subunit 2	1,046 bp	26.1%	26.1%	14.4%	33.4%	47.80%	−0.396	0.000
COX1Cytochrome c oxidase subunit I	1,551 bp	24.4%	29.6%	18.6%	27.4%	46.04%	−0.190	−0.097
COX2Cytochrome c oxidase subunit II	691 bp	29.1%	28.4%	15.8%	26.8%	42.55%	−0.259	+0.013
ATP8ATP synthase F0 subunit 8	168 bp	28.6%	23.2%	13.1%	35.1%	48.21%	−0.457	+0.103
ATP6ATP synthase F0 subunit 6	684 bp	26.9%	27.9%	12.9%	32.3%	45.18%	−0.430	−0.019
COX3Cytochrome c oxidase subunit III	786 bp	25.1%	28.1%	17.4%	29.4%	46.82%	−0.255	−0.057
ND3NADH dehydrogenase subunit 3	349 bp	20.9%	30.7%	15.8%	32.7%	48.42%	−0.349	−0.189
ND4LNADH dehydrogenase subunit 4L	297 bp	20.9%	30.6%	17.2%	31.3%	48.49%	−0.292	−0.190
ND4NADH dehydrogenase subunit 4	1,381 bp	25.3%	28.4%	15.9%	30.5%	46.34%	−0.316	−0.058
ND5NADH dehydrogenase subunit 5	1,839 bp	27.2%	27.6%	15.0%	30.2%	45.19%	−0.338	−0.008
ND6NADH dehydrogenase subunit 6	522 bp	36.6%	16.3%	15.1%	32.0%	47.13%	−0.358	+0.384
CYTBCytochrome b	1,141 bp	25.1%	29.5%	15.7%	29.7%	45.40%	−0.309	−0.082
12S rRNA12S ribosomal RNA	946 bp	30.1%	19.7%	22.2%	28.0%	50.21%	−0.116	+0.210
16S rRNA16S ribosomal RNA	1,692 bp	32.8%	21.2%	20.7%	25.3%	46.04%	−0.099	+0.216
D-loopControl region (D-loop)	953 bp	34.4%	31.2%	15.7%	18.7%	34.42%	−0.085	+0.050

Codon usage

Counts per codon, darker is more frequent

Gene

3,808 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%

UUU109

UUC120

Leu L17.5%

UUA107

UUG31

CUU159

CUC138

CUA185

CUG47

Ile I6.9%

AUU164

AUC97

Met M3.8%

AUA88

AUG57

Val V6.1%

GUU64

GUC61

GUA81

GUG27

Ser S6.3%

UCU44

UCC56

UCA73

UCG8

AGU14

AGC45

Pro P5.8%

CCU49

CCC108

CCA49

CCG14

Thr T7.8%

ACU43

ACC128

ACA113

ACG14

Ala A9.5%

GCU69

GCC164

GCA111

GCG17

Tyr Y3.0%

UAU47

UAC66

His H2.7%

CAU32

CAC72

Gln Q2.5%

CAA71

CAG25

Asn N2.9%

AAU51

AAC61

Lys K1.9%

AAA53

AAG21

Asp D2.1%

GAU27

GAC52

Glu E2.5%

GAA72

GAG25

Cys C0.7%

UGU8

UGC18

Trp W3.1%

UGA99

UGG20

Arg R2.1%

CGU9

CGC21

CGA41

CGG8

Gly G6.5%

GGU43

GGC89

GGA70

GGG45

Stop 0.2%

UAA8

UAG0

AGA0

AGG0

Genome map

38 annotated features in NC_066933.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (45.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Sebastes caurinus (NC_066933.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	68	68 bp	+	–
12S rRNA	Ribosomal RNA	69	1,014	946 bp	+	50.2%
tRNA-Val	Transfer RNA	1,015	1,086	72 bp	+	–
16S rRNA	Ribosomal RNA	1,087	2,778	1,692 bp	+	46.0%
tRNA-Leu (UUR)	Transfer RNA	2,779	2,852	74 bp	+	–
ND1	Protein-coding gene	2,853	3,827	975 bp	+	48.8%
tRNA-Ile	Transfer RNA	3,832	3,901	70 bp	+	–
tRNA-Gln	Transfer RNA	3,901	3,971	71 bp	−	–
tRNA-Met	Transfer RNA	3,971	4,041	71 bp	+	–
ND2	Protein-coding gene	4,042	5,087	1,046 bp	+	47.8%
tRNA-Trp	Transfer RNA	5,088	5,158	71 bp	+	–
tRNA-Ala	Transfer RNA	5,160	5,228	69 bp	−	–
tRNA-Asn	Transfer RNA	5,230	5,302	73 bp	−	–
tRNA-Cys	Transfer RNA	5,341	5,409	69 bp	−	–
tRNA-Tyr	Transfer RNA	5,410	5,480	71 bp	−	–
COX1	Protein-coding gene	5,482	7,032	1,551 bp	+	46.0%
tRNA-Ser (UCN)	Transfer RNA	7,033	7,103	71 bp	−	–
tRNA-Asp	Transfer RNA	7,107	7,179	73 bp	+	–
COX2	Protein-coding gene	7,186	7,876	691 bp	+	42.6%
tRNA-Lys	Transfer RNA	7,877	7,950	74 bp	+	–
ATP8	Protein-coding gene	7,952	8,119	168 bp	+	48.2%
ATP6	Protein-coding gene	8,110	8,793	684 bp	+	45.2%
COX3	Protein-coding gene	8,793	9,578	786 bp	+	46.8%
tRNA-Gly	Transfer RNA	9,579	9,649	71 bp	+	–
ND3	Protein-coding gene	9,650	9,998	349 bp	+	48.4%
tRNA-Arg	Transfer RNA	9,999	10,067	69 bp	+	–
ND4L	Protein-coding gene	10,068	10,364	297 bp	+	48.5%
ND4	Protein-coding gene	10,358	11,738	1,381 bp	+	46.3%
tRNA-His	Transfer RNA	11,739	11,807	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,808	11,875	68 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,880	11,952	73 bp	+	–
ND5	Protein-coding gene	11,953	13,791	1,839 bp	+	45.2%
ND6	Protein-coding gene	13,788	14,309	522 bp	−	47.1%
tRNA-Glu	Transfer RNA	14,310	14,378	69 bp	−	–
CYTB	Protein-coding gene	14,385	15,525	1,141 bp	+	45.4%
tRNA-Thr	Transfer RNA	15,526	15,597	72 bp	+	–
tRNA-Pro	Transfer RNA	15,601	15,666	66 bp	−	–
D-loop	Control region	15,667	16,619	953 bp	–	34.4%