Sebastes diploproa
Splitnose rockfish
GC content
44.79%
Whole genome
Non-coding
2,125 bp
Including the D-loop
Where Splitnose rockfish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Splitnose rockfish has the 46th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome17,728 bp
- GC skew (G − C) / (G + C)
- −0.243
- AT skew (A − T) / (A + T)
- +0.024
Life history
- Maximum lifespan
- 84 years
- Adult weight
- 445.5 g
- Female sexual maturity
- 5 years
- Male sexual maturity
- 5 years
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 04517)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,728 bp
Protein-coding11,407 bp
12S rRNA946 bp
16S rRNA1,694 bp
All tRNA1,556 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 46.77% | −0.311 | −0.118 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 47.42% | −0.407 | +0.015 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 45.46% | −0.186 | −0.102 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 42.84% | −0.243 | +0.003 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 48.81% | −0.439 | +0.116 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 44.74% | −0.392 | −0.048 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 46.37% | −0.264 | −0.055 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 48.14% | −0.321 | −0.204 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.82% | −0.297 | −0.171 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.92% | −0.327 | −0.042 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 45.24% | −0.334 | −0.013 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 48.08% | −0.363 | +0.387 | |||||
| CYTBCytochrome b | 1,141 bp | 44.61% | −0.289 | −0.101 | |||||
| 12S rRNA12S ribosomal RNA | 946 bp | 50.21% | −0.107 | +0.202 | |||||
| 16S rRNA16S ribosomal RNA | 1,694 bp | 46.52% | −0.086 | +0.205 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU119
UUC111
Leu L17.5%
UUA115
UUG23
CUU170
CUC131
CUA177
CUG51
Ile I6.7%
AUU162
AUC93
Met M3.9%
AUA88
AUG59
Val V6.2%
GUU72
GUC52
GUA86
GUG25
Ser S6.3%
UCU46
UCC53
UCA73
UCG10
AGU14
AGC45
Pro P5.8%
CCU42
CCC113
CCA52
CCG14
Thr T7.8%
ACU44
ACC123
ACA110
ACG21
Ala A9.5%
GCU60
GCC172
GCA112
GCG18
Tyr Y2.9%
UAU55
UAC57
His H2.8%
CAU27
CAC78
Gln Q2.5%
CAA77
CAG19
Asn N3.0%
AAU52
AAC61
Lys K1.9%
AAA54
AAG20
Asp D2.0%
GAU27
GAC51
Glu E2.5%
GAA67
GAG30
Cys C0.7%
UGU8
UGC18
Trp W3.1%
UGA105
UGG14
Arg R2.0%
CGU9
CGC19
CGA40
CGG10
Gly G6.5%
GGU47
GGC81
GGA71
GGG47
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
37 annotated features in NC_082821.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,014 | 946 bp | + | 50.2% |
| tRNA-Val | Transfer RNA | 1,015 | 1,086 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,087 | 2,780 | 1,694 bp | + | 46.5% |
| tRNA-Leu (UUR) | Transfer RNA | 2,781 | 2,854 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,855 | 3,829 | 975 bp | + | 46.8% |
| tRNA-Ile | Transfer RNA | 3,833 | 3,904 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,903 | 3,973 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,973 | 4,043 | 71 bp | + | – |
| ND2 | Protein-coding gene | 4,044 | 5,089 | 1,046 bp | + | 47.4% |
| tRNA-Trp | Transfer RNA | 5,090 | 5,160 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,162 | 5,230 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,232 | 5,304 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,342 | 5,408 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,412 | 5,482 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,484 | 7,034 | 1,551 bp | + | 45.5% |
| tRNA-Ser (UCN) | Transfer RNA | 7,035 | 7,105 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,109 | 7,181 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,188 | 7,878 | 691 bp | + | 42.8% |
| tRNA-Lys | Transfer RNA | 7,879 | 7,952 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,954 | 8,121 | 168 bp | + | 48.8% |
| ATP6 | Protein-coding gene | 8,112 | 8,795 | 684 bp | + | 44.7% |
| COX3 | Protein-coding gene | 8,795 | 9,579 | 785 bp | + | 46.4% |
| tRNA-Gly | Transfer RNA | 9,580 | 9,652 | 73 bp | + | – |
| ND3 | Protein-coding gene | 9,653 | 10,001 | 349 bp | + | 48.1% |
| tRNA-Arg | Transfer RNA | 10,002 | 10,070 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,071 | 10,367 | 297 bp | + | 48.8% |
| ND4 | Protein-coding gene | 10,361 | 11,741 | 1,381 bp | + | 46.9% |
| tRNA-His | Transfer RNA | 11,742 | 11,810 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,811 | 11,878 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,883 | 11,955 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,956 | 13,794 | 1,839 bp | + | 45.2% |
| ND6 | Protein-coding gene | 13,791 | 14,312 | 522 bp | − | 48.1% |
| tRNA-Glu | Transfer RNA | 14,313 | 14,381 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,388 | 15,528 | 1,141 bp | + | 44.6% |
| tRNA-Thr | Transfer RNA | 15,529 | 15,600 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,600 | 15,669 | 70 bp | − | – |